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SR-VP_26_10_2020_1_100CM_scaffold_3327757

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2020_1_100CM_scaffold_3327757_1
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(1..2571)
DNA (2571bp) protein (857aa)
acetyl-CoA synthetase / acetyltransferase (GNAT) family protein (EC:6.2.1.13)
Acetyl-CoA synthetase / acetyltransferase (GNAT) family protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJV8_9BACT
Tax=RBG_13_Bathyarchaeota_46_16b_curated
SR-VP_26_10_2020_1_100CM_scaffold_3327757_2
unknown

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comp(2746..3180)
DNA (435bp) protein (145aa)
HEPN domain protein
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI0003720A4F
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3327757_3
Geoglobus ahangari, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(3177..3689)
DNA (513bp) protein (171aa)
DNA polymerase subunit beta
DNA polymerase beta domain protein region n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S255_FERPA
Putative nucleotidyltransferase {ECO:0000313|EMBL:AKG91275.1}; TaxID=113653 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geoglobus.;" source="Geoglobus ahangari.;"
SR-VP_26_10_2020_1_100CM_scaffold_3327757_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4134..4259
DNA (126bp) protein (42aa)
thermosome, chaperonin Cpn60/TCP-1
UPI0003D1A02C related cluster n=1 Tax=unknown RepID=UPI0003D1A02C
Thermosome subunit {ECO:0000313|EMBL:KCZ70730.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_3327757_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4299..4523
DNA (225bp) protein (75aa)
chaperonin Cpn10
10 kDa chaperonin n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E9S7_METMS
Co-chaperonin GroES {ECO:0000313|EMBL:KCZ71002.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_3327757_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4576..6198
DNA (1623bp) protein (541aa)
groEL; chaperonin GroEL
groEL; molecular chaperone GroEL; K04077 chaperonin GroEL id=5041649 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Chaperonin GroL {ECO:0000313|EMBL:KCZ71001.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_3327757_7
Methanolobus psychrophilus, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6310..6657
DNA (348bp) protein (116aa)
Fe-S cluster domain protein
Fe-S cluster domain protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MFZ0_9EURY
Fe-S cluster domain protein {ECO:0000313|EMBL:AFV24247.1}; TaxID=1094980 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus psychrophilus R15.;"
SR-VP_26_10_2020_1_100CM_scaffold_3327757_8
unknown

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6701..7417
DNA (717bp) protein (239aa)
ABC transporter ATP-binding protein
Uncharacterized protein id=1796063 bin=GWD2_Nitrospirae-related_57_8 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3327757_9
unknown

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7410..8345
DNA (936bp) protein (312aa)
hypothetical protein
Putative FeS assembly protein SufBD id=1796061 bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3327757_10
unknown

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8485..9555
DNA (1071bp) protein (357aa)
acr3; arsenical-resistance protein, ACR3 family
Arsenical-resistance protein, ACR3 family n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I5Q2_METCZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3327757_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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9705..10496
DNA (792bp) protein (264aa)
N-6 DNA methylase
n-6 DNA methylase id=4480019 bin=GWF2_Bacteroidetes_43_63 species=Flavobacteriaceae bacterium S85 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:KCZ72871.1}; EC=2.1.1.72 {ECO:0000313|EMBL:KCZ72871.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_3327757_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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10694..11356
DNA (663bp) protein (221aa)
n-6 DNA methylase
Putative uncharacterized protein id=4791465 bin=GWA2_Ignavibacteria-rel_35_8 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:KCZ72871.1}; EC=2.1.1.72 {ECO:0000313|EMBL:KCZ72871.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_3327757_13
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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11443..11919
DNA (477bp) protein (159aa)
cytoplasmic protein
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JZI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS39630.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
SR-VP_26_10_2020_1_100CM_scaffold_3327757_14
Cylindrospermopsis raciborskii, Cylindrospermopsis, Nostocales, Cyanobacteria, Bacteria

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12292..13659
DNA (1368bp) protein (456aa)
type I site-specific restriction-modificationsystem, S subunit
Restriction modification system DNA specificity domain protein n=1 Tax=Cylindrospermopsis raciborskii CS-505 RepID=D4TLJ3_9NOST
Restriction modification system DNA specificity domain protein {ECO:0000313|EMBL:EFA68245.1}; TaxID=533240 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Cylindrospermopsis.;" source="Cylindrospermopsis raciborskii CS-505.;"
SR-VP_26_10_2020_1_100CM_scaffold_3327757_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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13925..14890
DNA (966bp) protein (322aa)
type III restriction protein res subunit
DEAD/DEAH box helicase n=1 Tax=planctomycete KSU-1 RepID=I3IRI2_9PLAN
Type I restriction enzyme R protein {ECO:0000313|EMBL:KCZ72869.1}; EC=3.1.21.3 {ECO:0000313|EMBL:KCZ72869.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Displaying 15 items

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