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SR-VP_26_10_2020_1_100CM_scaffold_4026354

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2020_1_100CM_scaffold_4026354_1
unknown

Not on your lists

88..537
DNA (450bp) protein (150aa)
hypothetical protein
Sjogrens syndrome scleroderma autoantigen 1 n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B953_METTP
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_4026354_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(549..2039)
DNA (1491bp) protein (497aa)
small ribosomal subunit Rsm22 (methyltransferase)
UPI0003D1C530 related cluster n=1 Tax=unknown RepID=UPI0003D1C530
Ribosomal methyltransferase Rsm22 {ECO:0000313|EMBL:KCZ72073.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_4026354_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2212..3228
DNA (1017bp) protein (339aa)
Flap structure-specific endonuclease (EC:3.-.-.-)
Flap endonuclease 1 n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=FEN_METAC
Flap endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; Short=FEN-1 {ECO:0000256|HAMAP-Rule:MF_00614};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00614};; Flap structure-specific endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_4026354_4
unknown

Not on your lists

3279..3581
DNA (303bp) protein (101aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_4026354_5
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3676..4770
DNA (1095bp) protein (365aa)
hypothetical protein
Conserved transmembrane protein (DUF373) n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WJW7_METH6
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_4026354_6
unknown

Not on your lists

4796..4942
DNA (147bp) protein (49aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_4026354_7
unknown

Not on your lists

4994..5953
DNA (960bp) protein (320aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TQR6_METAC
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_4026354_8
unknown

Not on your lists

6038..7303
DNA (1266bp) protein (422aa)
Adenylosuccinate synthetase
Adenylosuccinate synthetase n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1Q7S3_METMZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_4026354_9
unknown

Not on your lists

7330..8994
DNA (1665bp) protein (555aa)
Cell division protein FtsH (EC:3.4.24.-)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TPU1_METAC
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_4026354_10
unknown

Not on your lists

9130..9597
DNA (468bp) protein (156aa)
AAA ATPase (EC:3.6.1.3)
AAA family ATPase, CDC48 subfamily n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XN57_METZD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_4026354_11
unknown

Not on your lists

9612..10619
DNA (1008bp) protein (336aa)
radical SAM protein
Radical SAM domain protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E7B5_METMS
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_4026354_12
unknown

Not on your lists

comp(10520..10744)
DNA (225bp) protein (75aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_4026354_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10787..12403)
DNA (1617bp) protein (539aa)
iron-sulfur cluster-binding protein
Predicted iron-sulfur cluster-binding protein n=1 Tax=Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC) RepID=D8GII3_CLOLD
Uncharacterized protein {ECO:0000313|EMBL:KCZ70383.1}; Flags: Precursor;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_4026354_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12777..12965
DNA (189bp) protein (63aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQ85_ARCVS
Uncharacterized protein {ECO:0000313|EMBL:KCZ72221.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_4026354_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12986..13294
DNA (309bp) protein (103aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FM89_9EURY
PemK-like protein {ECO:0000313|EMBL:KCZ72220.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_4026354_16
unknown

Not on your lists

13433..13546
DNA (114bp) protein (38aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_4026354_17
unknown

Not on your lists

13497..14405
DNA (909bp) protein (303aa)
hypothetical protein
hypothetical protein; K09799 hypothetical protein id=5803102 bin=OD1_GWC2_34_28 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_4026354_18
unknown

Not on your lists

14437..15639
DNA (1203bp) protein (401aa)
hypothetical protein
UPF0272 protein Metev_2176 n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EAK3_METEZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_4026354_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15575..16393)
DNA (819bp) protein (273aa)
lipoate-protein ligase A (EC:2.7.7.63)
biotin/lipoate A/B protein ligase; K03800 lipoate-protein ligase A [EC:2.7.7.63] id=5240860 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Lipoate-protein ligase A {ECO:0000313|EMBL:KCZ70826.1}; EC=2.7.7.63 {ECO:0000313|EMBL:KCZ70826.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_4026354_20
unknown

Not on your lists

comp(16397..17197)
DNA (801bp) protein (267aa)
methyltransferase type 11
Methyltransferase type 11 n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BX88_9GAMM
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_4026354_21
unknown

Not on your lists

comp(17295..17627)
DNA (333bp) protein (111aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_4026354_22
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

17778..18371
DNA (594bp) protein (198aa)
hypothetical protein
SNARE associated Golgi protein-like protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GWF6_METFV
SNARE associated Golgi protein-like protein {ECO:0000313|EMBL:ADP77921.1}; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 /; V24 S).;"
SR-VP_26_10_2020_1_100CM_scaffold_4026354_23
unknown

Not on your lists

18457..19479
DNA (1023bp) protein (341aa)
hypothetical protein
Conserved hypothetical membrane-spanning protein n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=Q2NE81_METST
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_4026354_24
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19549..20361)
DNA (813bp) protein (271aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12WE3_METBU
Putative ATP-utilizing enzyme (ATP-grasp superfamily) {ECO:0000313|EMBL:KCZ70580.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_4026354_25
unknown

Not on your lists

comp(20428..20625)
DNA (198bp) protein (66aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_4026354_26
unknown

Not on your lists

comp(20996..21457)
DNA (462bp) protein (154aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) RepID=B9MRB4_CALBD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_4026354_27
unknown

Not on your lists

21671..22942
DNA (1272bp) protein (424aa)
L-threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAN1_METMS
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_4026354_28
unknown

Not on your lists

22954..23229
DNA (276bp) protein (92aa)
MoaD family protein
MoaD family protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAN0_METMS
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_4026354_29
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(23240..24658)
DNA (1419bp) protein (473aa)
Dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoamide dehydrogenase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PS09_METMA
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component {ECO:0000313|EMBL:KCZ71539.1}; EC=1.8.1.4 {ECO:0000313|EMBL:KCZ71539.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_4026354_30
unknown

Not on your lists

24775..25308
DNA (534bp) protein (178aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XL20_METZD
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying items 1-30 of 42 in total

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