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SR-VP_26_10_2020_1_100CM_scaffold_3833412

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2020_1_100CM_scaffold_3833412_1
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1..708)
DNA (708bp) protein (236aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KZV1_METHD
Uncharacterized protein {ECO:0000313|EMBL:AKB24620.1}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. MTP4.;"
SR-VP_26_10_2020_1_100CM_scaffold_3833412_2
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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1411..1740
DNA (330bp) protein (110aa)
putative nucleotidyltransferase
Putative nucleotidyltransferase n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HEZ4_METFS
Putative nucleotidyltransferase {ECO:0000313|EMBL:AGB01888.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
SR-VP_26_10_2020_1_100CM_scaffold_3833412_3
CG_OP9-01, Atribacteria, Bacteria

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1730..2125
DNA (396bp) protein (132aa)
hypothetical protein
HEPN n=1 Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FRB1_METHJ
Tax=CG_OP9-01
SR-VP_26_10_2020_1_100CM_scaffold_3833412_4
unknown

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comp(2212..3513)
DNA (1302bp) protein (434aa)
fmdB; formylmethanofuran dehydrogenase subunit B (EC:1.2.99.5)
Formylmethanofuran dehydrogenase subunit B n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BV64_METCG
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3833412_5
unknown

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comp(3515..3910)
DNA (396bp) protein (132aa)
Formylmethanofuran dehydrogenase (molybdenum) subunit D (EC:1.2.99.5)
Molybdenum-containing formylmethanofuran dehydrogenase n=2 Tax=Methanosarcina mazei RepID=Q8PWL6_METMA
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3833412_6
unknown

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comp(3914..4720)
DNA (807bp) protein (269aa)
formylmethanofuran dehydrogenase subunit C
Formylmethanofuran dehydrogenase subunit C n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KWB0_METHD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3833412_7
unknown

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comp(4726..6498)
DNA (1773bp) protein (591aa)
fmdA; formylmethanofuran dehydrogenase subunit A
Formylmethanofuran dehydrogenase subunit A n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BV67_METCG
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3833412_8
unknown

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comp(6498..7526)
DNA (1029bp) protein (343aa)
Molybdenum formylmethanofuran dehydrogenase, subunit F
Molybdenum formylmethanofuran dehydrogenase, subunit F n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WNG0_METH6
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3833412_9
unknown

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comp(7530..8201)
DNA (672bp) protein (224aa)
Molybdenum formylmethanofuran dehydrogenase, subunit E
Molybdenum formylmethanofuran dehydrogenase, subunit E n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WNG1_METH6
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3833412_10
unknown

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comp(8217..9089)
DNA (873bp) protein (291aa)
ABC transporter substrate-binding protein
Extracellular solute-binding protein family 1 n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CJU8_DESK7
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3833412_11
unknown

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comp(9153..9452)
DNA (300bp) protein (100aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_3833412_12
unknown

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9515..10294
DNA (780bp) protein (260aa)
DhnA-type fructose-1,6-bisphosphate aldolase-like enzyme (EC:4.1.2.-)
fructose-bisphosphate aldolase n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B7BA39
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3833412_13
unknown

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10300..11277
DNA (978bp) protein (326aa)
theronine dehydrogenase-like Zn-dependent dehydrogenase
alcohol dehydrogenase n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B74ACC
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3833412_14
unknown

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comp(11333..12352)
DNA (1020bp) protein (340aa)
O-methyltransferase 2
O-methyltransferase family 2 n=2 Tax=mine drainage metagenome RepID=T0ZV06_9ZZZZ
O-methyltransferase family 2 {ECO:0000313|EMBL:EQD52076.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
SR-VP_26_10_2020_1_100CM_scaffold_3833412_15
unknown

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comp(12489..13598)
DNA (1110bp) protein (370aa)
FO synthase subunit 2
FO synthase subunit 2 n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MSP4_9EURY
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3833412_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(13626..14618)
DNA (993bp) protein (331aa)
cofG; FO synthase subunit 1 (EC:2.5.1.-)
FO synthase subunit 1 n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=COFG_METBU
FO synthase subunit 1 {ECO:0000256|HAMAP-Rule:MF_01611}; EC=2.5.1.77 {ECO:0000256|HAMAP-Rule:MF_01611};; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1 {ECO:0000256|HAMAP-Rule:MF_01611}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_3833412_trna_1
unknown

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14707..14791
DNA (85bp)
transferRNA Leu
SR-VP_26_10_2020_1_100CM_scaffold_3833412_trna_2
unknown

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comp(15030..15103)
DNA (74bp)
transferRNA Val
SR-VP_26_10_2020_1_100CM_scaffold_3833412_17
unknown

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15196..15303
DNA (108bp) protein (36aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_3833412_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15331..15489
DNA (159bp) protein (53aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71838.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_3833412_19
unknown

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16384..17280
DNA (897bp) protein (299aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_3833412_20
unknown

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17378..17839
DNA (462bp) protein (154aa)

This feature has no annotations

Displaying 22 items

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