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SR-VP_26_10_2020_1_100CM_scaffold_2951849

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2020_1_100CM_scaffold_2951849_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3..485)
DNA (483bp) protein (161aa)
Cobalt-precorrin-2 C20-methyltransferase (EC:2.1.1.130)
Cobalt-factor II C20-methyltransferase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46ET6_METBF
Precorrin-4 C11-methyltransferase {ECO:0000313|EMBL:KCZ71786.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_2951849_2
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(485..1003)
DNA (519bp) protein (173aa)
cbiT; precorrin-8W decarboxylase
Probable cobalt-precorrin-6Y C(15)-methyltransferase [decarboxylating] n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=CBIT_METAC
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_2951849_3
unknown

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comp(1083..1322)
DNA (240bp) protein (80aa)
putative periplasmic or secreted lipoprotein
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JDW9_9ARCH
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_2951849_4
unknown

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comp(1319..1564)
DNA (246bp) protein (82aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JDX0_9ARCH
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_2951849_5
unknown

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comp(1783..2700)
DNA (918bp) protein (306aa)
deoxyhypusine synthase
Probable deoxyhypusine synthase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XLU3_METZD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_2951849_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2715..4157)
DNA (1443bp) protein (481aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PZH7_METMA
UDP-N-acetylmuramyl pentapeptide synthase {ECO:0000313|EMBL:KCZ71123.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_2951849_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4157..4561)
DNA (405bp) protein (135aa)
cobalamin (vitamin B12) biosynthesis protein CbiX
Sirohydrochlorin cobaltochelatase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8C7_METEZ
Sirohydrochlorin cobaltochelatase {ECO:0000256|HAMAP-Rule:MF_00785}; EC=4.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00785};; CbiXS {ECO:0000256|HAMAP-Rule:MF_00785}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_2951849_8
unknown

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4824..5174
DNA (351bp) protein (117aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G717_CHLAD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_2951849_9
unknown

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comp(5400..6413)
DNA (1014bp) protein (338aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL19377.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SR-VP_26_10_2020_1_100CM_scaffold_2951849_trna_1
unknown

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comp(6578..6651)
DNA (74bp)
transferRNA Thr
SR-VP_26_10_2020_1_100CM_scaffold_2951849_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7119..8123
DNA (1005bp) protein (335aa)
RNA 3'-phosphate cyclase (EC:6.5.1.4)
RNA 3'-phosphate cyclase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMI3_METZD
RNA 3'-terminal phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200}; Short=RNA cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; Short=RNA-3'-phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; EC=6.5.1.4 {ECO:0000256|HAMAP-Rule:MF_00200};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_2951849_11
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8120..8740)
DNA (621bp) protein (207aa)
RNA 2'-phosphotransferase-like protein
Probable RNA 2'-phosphotransferase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12V71_METBU
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_2951849_12
unknown

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comp(8808..9047)
DNA (240bp) protein (80aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_2951849_13
unknown

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comp(9063..9512)
DNA (450bp) protein (150aa)
hypothetical protein
UPF0179 protein Mbar_A0292 n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Y292_METBF
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_2951849_14
unknown

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comp(9569..10639)
DNA (1071bp) protein (357aa)
egsA; NAD(P)-dependent glycerol-1-phosphate dehydrogenase (EC:1.1.1.261)
Glycerol-1-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=G1PDH_METAC
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_2951849_15
unknown

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10645..11505
DNA (861bp) protein (287aa)
hypothetical protein
Putative membrane protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXN3_METHD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_2951849_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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11507..12148
DNA (642bp) protein (214aa)
Integral membrane protein
Integral membrane protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TJT9_METAC
Uncharacterized membrane protein {ECO:0000313|EMBL:KCZ73608.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_2951849_17
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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12218..13492
DNA (1275bp) protein (425aa)
ATP-dependent DNA helicase RecQ
DNA helicase RecQ n=1 Tax=planctomycete KSU-1 RepID=I3IKR7_9PLAN
DNA helicase RecQ {ECO:0000313|EMBL:GAB62312.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
Displaying 18 items

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