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SR-VP_26_10_2020_1_100CM_scaffold_1175983

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2020_1_100CM_scaffold_1175983_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1..1716
DNA (1716bp) protein (572aa)
multisensor signal transduction histidine kinase
Multi-sensor hybrid histidine kinase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SLB5_9DELT
PAS domain S-box {ECO:0000313|EMBL:KCZ72948.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1175983_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1753..2463
DNA (711bp) protein (237aa)
circadian clock protein KaiC
Putative circadian clock protein, KaiC n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D3T5_METSW
RecA-superfamily ATPase possibly involved in signal transduction {ECO:0000313|EMBL:KCZ72947.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1175983_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2478..3461)
DNA (984bp) protein (328aa)
thiamine-monophosphate kinase
Thiamine-monophosphate kinase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MGJ2_9EURY
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {ECO:0000256|HAMAP-Rule:MF_02128};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1175983_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3568..4032
DNA (465bp) protein (155aa)
riboflavin synthase
Riboflavin synthase n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HDQ2_METFS
Riboflavin synthase {ECO:0000256|PIRNR:PIRNR015750}; EC=2.5.1.9 {ECO:0000256|PIRNR:PIRNR015750};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1175983_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4252..6051)
DNA (1800bp) protein (600aa)
archaeosine tRNA-ribosyltransferase
Archaeosine tRNA-ribosyltransferase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MPW4_9EURY
tRNA-guanine transglycosylase {ECO:0000313|EMBL:KCZ72358.1}; EC=2.4.2.- {ECO:0000313|EMBL:KCZ72358.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1175983_6
unknown

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comp(6126..6398)
DNA (273bp) protein (91aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_1175983_7
unknown

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comp(6540..6773)
DNA (234bp) protein (78aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_1175983_8
Methanoculleus sp. MH98A, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(6776..7513)
DNA (738bp) protein (246aa)
cell division ATPase MinD
Site-determining protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z1I7_METPS
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1495314 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus sp. MH98A.;"
SR-VP_26_10_2020_1_100CM_scaffold_1175983_9
Geoglobus ahangari, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(7519..8823)
DNA (1305bp) protein (435aa)
beta-galactosidase domain-containing protein
Beta-galactosidase domain protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KRA8_ARCVS
CARDB {ECO:0000313|EMBL:AKG92139.1}; TaxID=113653 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geoglobus.;" source="Geoglobus ahangari.;"
SR-VP_26_10_2020_1_100CM_scaffold_1175983_10
unknown

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comp(8977..9318)
DNA (342bp) protein (114aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_1175983_11

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comp(9302..10300)
DNA (999bp) protein (333aa)
hypothetical protein
Hypothetical membrane protein n=1 Tax=uncultured archaeon RepID=D1JH53_9ARCH
Hypothetical membrane protein {ECO:0000313|EMBL:CBH37861.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
SR-VP_26_10_2020_1_100CM_scaffold_1175983_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10272..11846)
DNA (1575bp) protein (525aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70808.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1175983_13

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comp(11872..12594)
DNA (723bp) protein (241aa)
peptidase S24/S26A/S26B, conserved region
Hypothetical membrane protein n=1 Tax=uncultured archaeon RepID=D1JH51_9ARCH
Hypothetical membrane protein {ECO:0000313|EMBL:CBH37859.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
SR-VP_26_10_2020_1_100CM_scaffold_1175983_14
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(12626..13225)
DNA (600bp) protein (200aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S3K6_FERPA
Uncharacterized protein {ECO:0000313|EMBL:ADC64839.1}; Flags: Precursor;; TaxID=589924 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ferroglobus.;" source="Ferroglobus placidus (strain DSM 10642 / AEDII12DO).;"
SR-VP_26_10_2020_1_100CM_scaffold_1175983_15
unknown

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comp(13333..13761)
DNA (429bp) protein (143aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_1175983_16
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(13765..14460)
DNA (696bp) protein (232aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S3J8_FERPA
Uncharacterized protein {ECO:0000313|EMBL:ADC64831.1}; Flags: Precursor;; TaxID=589924 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ferroglobus.;" source="Ferroglobus placidus (strain DSM 10642 / AEDII12DO).;"
SR-VP_26_10_2020_1_100CM_scaffold_1175983_17
unknown

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comp(14505..16148)
DNA (1644bp) protein (548aa)
hypothetical protein
SR-VP_26_10_2020_1_100CM_scaffold_1175983_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16148..18367)
DNA (2220bp) protein (740aa)
putative membrane protein, required for N-linked glycosylation
Putative membrane protein, required for N-linked glycosylation n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KWP5_METHD
Oligosaccharyl transferase, archaeosortase system-associated {ECO:0000313|EMBL:KCZ70958.1}; EC=2.4.99.18 {ECO:0000313|EMBL:KCZ70958.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1175983_19
RIFCSPHIGHO2_12_FULL_OP11_Roizmanbacteria_36_11_curated, Roizmannbacteria, Microgenomates, Bacteria

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comp(18410..20098)
DNA (1689bp) protein (563aa)
Tax=RIFCSPHIGHO2_12_FULL_OP11_Roizmanbacteria_36_11_curated
SR-VP_26_10_2020_1_100CM_scaffold_1175983_20
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(20118..21605)
DNA (1488bp) protein (496aa)
pyrrolo-quinoline quinone repeat-containing protein
Pyrrolo-quinoline quinone n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WJ47_9EURY
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:ELY49256.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 10635.;"
SR-VP_26_10_2020_1_100CM_scaffold_1175983_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

21772..22404
DNA (633bp) protein (211aa)
GTP-binding protein
GTP-binding protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MCY8_9EURY
Small GTP-binding protein domain {ECO:0000313|EMBL:KCZ70572.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1175983_22
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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22475..22834
DNA (360bp) protein (120aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12UV2_METBU
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_1175983_23
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

22838..23254
DNA (417bp) protein (139aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12ZG7_METBU
Zn-ribbon containing protein {ECO:0000313|EMBL:KCZ70570.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1175983_24
unknown

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comp(23251..23691)
DNA (441bp) protein (147aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8W1_METEZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1175983_25
unknown

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23843..24034
DNA (192bp) protein (64aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1175983_26
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(24045..24254)
DNA (210bp) protein (70aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_1175983_27
unknown

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24304..25704
DNA (1401bp) protein (467aa)
DNA primase small subunit (EC:2.7.7.-)
DNA primase small subunit PriS n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=PRIS_METBF
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1175983_28
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

25697..26344
DNA (648bp) protein (216aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B687_METTP
Uncharacterized protein {ECO:0000313|EMBL:KCZ71963.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1175983_29
unknown

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26350..26634
DNA (285bp) protein (95aa)
rpl44e; 50S ribosomal protein L44
UPI0003D1AE67 related cluster n=1 Tax=unknown RepID=UPI0003D1AE67
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1175983_30
unknown

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26637..26810
DNA (174bp) protein (58aa)
30S ribosomal protein S27E
UPI0003D1ABE2 related cluster n=1 Tax=unknown RepID=UPI0003D1ABE2
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying items 1-30 of 37 in total

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