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SR-VP_26_10_2020_1_100CM_scaffold_1635010

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2020_1_100CM_scaffold_1635010_1

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comp(677..1405)
DNA (729bp) protein (243aa)
carboxymethylenebutenolidase (EC:3.1.1.45)
Carboxymethylenebutenolidase n=1 Tax=Arthrobacter sp. SJCon RepID=L8TQ87_9MICC
Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_48_21_curated
SR-VP_26_10_2020_1_100CM_scaffold_1635010_2
unknown

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comp(1511..1996)
DNA (486bp) protein (162aa)
putative membrane protein
Uncharacterized protein n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2RUS2_METFO
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1635010_3
unknown

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comp(2005..3219)
DNA (1215bp) protein (405aa)
ABC transporter permease
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000382730D
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1635010_4
unknown

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comp(3225..3671)
DNA (447bp) protein (149aa)
ABC-type antimicrobial peptide transport system, ATPase component
macrolide ABC transporter ATP-binding protein n=1 Tax=Lachnospiraceae bacterium NK4A179 RepID=UPI0003B53E4C
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1635010_5
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3677..4279)
DNA (603bp) protein (201aa)
transcriptional regulator
Transcriptional regulator n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KYD8_METHD
Transcriptional regulator {ECO:0000313|EMBL:AGB50462.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
SR-VP_26_10_2020_1_100CM_scaffold_1635010_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4690..5241
DNA (552bp) protein (184aa)
Rubrerythrin
Rubrerythrin n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PUY9_METMA
Rubrerythrin {ECO:0000313|EMBL:KCZ70936.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1635010_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5354..6649
DNA (1296bp) protein (432aa)
erythromycin esterase-like enzyme
Erythromycin esterase-like enzyme n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXY2_METHD
Erythromycin esterase-like enzyme {ECO:0000313|EMBL:KCZ71883.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1635010_8

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6723..7793
DNA (1071bp) protein (357aa)
C4-dicarboxylate transporter
Putative C4-dicarboxylate transporter n=1 Tax=Geobacillus thermodenitrificans (strain NG80-2) RepID=A4IT22_GEOTN
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
SR-VP_26_10_2020_1_100CM_scaffold_1635010_9
unknown

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7929..8657
DNA (729bp) protein (243aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_1635010_10
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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8919..11699
DNA (2781bp) protein (927aa)
hypothetical protein
Respiratory nitrate reductase alpha subunit apoprotein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NV35_HALBP
Uncharacterized protein {ECO:0000313|EMBL:AJE02766.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
SR-VP_26_10_2020_1_100CM_scaffold_1635010_11
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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11699..12733
DNA (1035bp) protein (345aa)
hypothetical protein
chemotaxis protein CheY n=1 Tax=Halomonas jeotgali RepID=UPI00034729E3
Tax=RBG_16_Gamma2_64_11_curated
SR-VP_26_10_2020_1_100CM_scaffold_1635010_12
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12964..13425
DNA (462bp) protein (154aa)
hypothetical protein
Tax=RBG_16_Gamma2_64_11_curated
SR-VP_26_10_2020_1_100CM_scaffold_1635010_13
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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13436..14107
DNA (672bp) protein (224aa)
cytoplasmic chaperone TorD family protein
Putative steroid C25 dehydrogenase-like delta-subunit n=1 Tax=Sterolibacterium denitrificans RepID=H9NN97_9RHOO
Tax=RBG_16_Gamma2_64_11_curated
SR-VP_26_10_2020_1_100CM_scaffold_1635010_14
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(14162..15436)
DNA (1275bp) protein (425aa)
GdhA2; glutamate dehydrogenase/leucine dehydrogenase
Glutamate dehydrogenase id=4830576 bin=GWC2_Nitrospirae_57_13 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1434104 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides methylutens MM1.;"
SR-VP_26_10_2020_1_100CM_scaffold_1635010_15
unknown

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comp(15467..15586)
DNA (120bp) protein (40aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_1635010_16

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15763..16110
DNA (348bp) protein (116aa)
hypothetical protein n=3 Tax=Archaea RepID=UPI00038280C6
Tax=RBG_16_Archaea_50_20_curated
SR-VP_26_10_2020_1_100CM_scaffold_1635010_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16563..17819)
DNA (1257bp) protein (419aa)
Histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=HISX_METBF
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1635010_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17869..18309)
DNA (441bp) protein (147aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TQ82_METAC
Putative DNA-binding protein with PD1-like DNA-binding motif {ECO:0000313|EMBL:KCZ70669.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1635010_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18408..18896
DNA (489bp) protein (163aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71222.1}; Flags: Precursor;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1635010_20
unknown

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comp(18893..19618)
DNA (726bp) protein (242aa)
radical SAM domain-containing protein
7-carboxy-7-deazaguanine synthase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E941_METEZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1635010_21
unknown

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comp(19643..20734)
DNA (1092bp) protein (364aa)
cell division protein FtsZ
Cell division protein FtsZ n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12UQ3_METBU
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1635010_22
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20753..22126)
DNA (1374bp) protein (458aa)
hypothetical protein
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EAD5_METEZ
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160314}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160312};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1635010_23
unknown

Not on your lists

comp(22147..22410)
DNA (264bp) protein (88aa)
PRC-barrel domain-containing protein
PRC-barrel domain protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XME7_METZD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1635010_24
unknown

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comp(22429..23172)
DNA (744bp) protein (248aa)
AAA ATPase (EC:3.6.1.3)
AAA family ATPase, CDC48 subfamily n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XKI8_METZD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1635010_25
unknown

Not on your lists

comp(23224..24651)
DNA (1428bp) protein (476aa)
ATPase AAA (EC:3.6.4.6)
ATPase AAA n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NH68_9EURY
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1635010_26
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24804..25970)
DNA (1167bp) protein (389aa)
2-methylcitrate synthase/citrate synthase II (EC:2.3.3.1)
Citrate synthase n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A4L7_NITMS
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; EC=2.3.3.16 {ECO:0000256|PIRNR:PIRNR001369};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1635010_27
unknown

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comp(25967..26122)
DNA (156bp) protein (52aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_1635010_28
unknown

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comp(26317..26874)
DNA (558bp) protein (186aa)
XRE family transcriptional regulator
Transcriptional regulator, XRE family n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EBT2_METMS
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1635010_29
unknown

Not on your lists

comp(27170..27298)
DNA (129bp) protein (43aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I6P7_METCZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1635010_30
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(27305..28240)
DNA (936bp) protein (312aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMU1_METZD
Leucyl aminopeptidase (Aminopeptidase T) {ECO:0000313|EMBL:KCZ70354.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Displaying 30 items

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