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SR-VP_26_10_2020_1_100CM_scaffold_6502185

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2020_1_100CM_scaffold_6502185_1
unknown

Not on your lists

1..195
DNA (195bp) protein (65aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_6502185_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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557..745
DNA (189bp) protein (63aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71651.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_6502185_3
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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720..1217
DNA (498bp) protein (166aa)
nucleotide-binding protein
Predicted nucleic acid-binding protein, containing PIN domain id=4582255 bin=GWC2_Planctomycete_KSU_39_26 species=Halosimplex carlsbadense genus=Halosimplex taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JCM 13916.;"
SR-VP_26_10_2020_1_100CM_scaffold_6502185_4
unknown

Not on your lists

comp(1509..3857)
DNA (2349bp) protein (783aa)
ccmF1; cytochrome c-type biogenesis protein
Cytochrome c-type biogenesis protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QT27_9EURY
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_6502185_5
unknown

Not on your lists

comp(3859..4341)
DNA (483bp) protein (161aa)
protein of unknown function DUF255
Uncharacterized protein n=1 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DXN2_THIND
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_6502185_6
Methanosarcina sp. 1.H.A.2.2, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4615..5097
DNA (483bp) protein (161aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q467Y5_METBF
Uncharacterized protein {ECO:0000313|EMBL:KKH46038.1}; TaxID=1483601 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.A.2.2.;"
SR-VP_26_10_2020_1_100CM_scaffold_6502185_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5126..5344)
DNA (219bp) protein (73aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMF8_METZD
Uncharacterized protein {ECO:0000313|EMBL:KCZ73411.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_6502185_8
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5589..8234
DNA (2646bp) protein (882aa)
Cbb3-type cytochrome oxidase, subunit 1
UPI0003D1C134 related cluster n=1 Tax=unknown RepID=UPI0003D1C134
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_6502185_9
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8239..8427
DNA (189bp) protein (63aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_6502185_10
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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8417..8668
DNA (252bp) protein (84aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_6502185_11
unknown

Not on your lists

comp(8676..10058)
DNA (1383bp) protein (461aa)
iron-sulfur cluster-binding protein
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein id=4603175 bin=GWC2_Methylomirabilis_70_16 species=Desulfitobacterium metallireducens genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_6502185_12
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10065..10781)
DNA (717bp) protein (239aa)
cytochrome c biogenesis protein transmembrane region
Cytochrome c biogenesis protein transmembrane region n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E617_METEZ
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_6502185_13
unknown

Not on your lists

comp(10788..11243)
DNA (456bp) protein (152aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_6502185_14
unknown

Not on your lists

comp(11253..12041)
DNA (789bp) protein (263aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Geobacillus sp. JF8 RepID=S5YYK5_9BACI
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_6502185_15
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12058..12510)
DNA (453bp) protein (151aa)
thioredoxin
Thioredoxin-related protein-like protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0L5W1_9BACT
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_6502185_16
unknown

Not on your lists

12648..13175
DNA (528bp) protein (176aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=Q5JGP5_THEKO
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_6502185_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13236..13691
DNA (456bp) protein (152aa)
hypothetical protein
hypothetical protein n=2 Tax=candidate division YNPFFA RepID=UPI0003764AD2
Putative butyrate kinase {ECO:0000313|EMBL:KCZ71305.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_6502185_18
unknown

Not on your lists

13740..15575
DNA (1836bp) protein (612aa)
metal-dependent phosphohydrolase
Metal-dependent phosphohydrolase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MEP9_9EURY
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_6502185_19
unknown

Not on your lists

15664..15774
DNA (111bp) protein (37aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_6502185_20
unknown

Not on your lists

comp(15819..16061)
DNA (243bp) protein (81aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_6502185_21
unknown

Not on your lists

16195..16587
DNA (393bp) protein (131aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_6502185_22
unknown

Not on your lists

comp(16658..18166)
DNA (1509bp) protein (503aa)
lysK; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B789_METTP
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_6502185_23
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18236..18697
DNA (462bp) protein (154aa)
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Putative phosphopantetheine adenylyltransferase n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W5C6_UNCMA
Cytidyltransferase-related enzyme {ECO:0000313|EMBL:KCZ71722.1}; EC=2.7.7.3 {ECO:0000313|EMBL:KCZ71722.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_6502185_24
Thermococcus barophilus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

18846..19061
DNA (216bp) protein (72aa)
hypothetical protein
Putative antitoxin TERMP_00310 n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LIL3_THEBM
Putative antitoxin TERMP_00310 {ECO:0000256|HAMAP-Rule:MF_00794}; TaxID=391623 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus barophilus (strain DSM 11836 / MP).;"
SR-VP_26_10_2020_1_100CM_scaffold_6502185_25
Methanocaldococcus sp. FS406-22, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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19210..19347
DNA (138bp) protein (46aa)
PilT protein domain protein
PilT protein domain protein n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S818_METSF
PilT protein domain protein {ECO:0000313|EMBL:ADC69178.1}; TaxID=644281 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus sp. (strain FS406-22).;"
SR-VP_26_10_2020_1_100CM_scaffold_6502185_26
Caldithrix abyssi, Caldithrix, Bacteria

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19494..19973
DNA (480bp) protein (160aa)
hypothetical protein
Uncharacterized protein family UPF0150 n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XS65_9BACT
Uncharacterized protein family UPF0150 {ECO:0000313|EMBL:EHO40229.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
SR-VP_26_10_2020_1_100CM_scaffold_6502185_27
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

19993..20211
DNA (219bp) protein (73aa)
hypothetical protein
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI0003755192
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_6502185_28
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

20208..20456
DNA (249bp) protein (83aa)
hypothetical protein
Uncharacterized protein family (UPF0150) n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BVU6_METCG
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_6502185_29
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

20553..20705
DNA (153bp) protein (51aa)
putative nucleotidyltransferase
Nucleotidyltransferase family protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HFM5_METFS
Nucleotidyltransferase family protein {ECO:0000313|EMBL:AGB01884.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
SR-VP_26_10_2020_1_100CM_scaffold_6502185_30
unknown

Not on your lists

21492..22361
DNA (870bp) protein (290aa)
serine/threonine protein kinase
Serine/threonine protein kinase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q468F1_METBF
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying items 1-30 of 37 in total

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