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SR-VP_26_10_2020_1_100CM_scaffold_5625425

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2020_1_100CM_scaffold_5625425_1

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3..1121
DNA (1119bp) protein (373aa)
recQ; ATP-dependent DNA helicase
DNA helicase RecQ n=1 Tax=planctomycete KSU-1 RepID=I3IKR7_9PLAN
Tax=RIFCSPLOWO2_12_FULL_Planctomycetes_39_13_curated
SR-VP_26_10_2020_1_100CM_scaffold_5625425_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1195..1422
DNA (228bp) protein (76aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70596.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_5625425_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1419..1793
DNA (375bp) protein (125aa)
Putative nucleic acid-binding protein, contains PIN domain {ECO:0000313|EMBL:KCZ70595.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_5625425_4
GWA2_OP11_40_6, Microgenomates, Bacteria

Not on your lists

comp(1838..2353)
DNA (516bp) protein (172aa)
type I restriction-modification system subunit S (EC:3.1.21.3)
Type I restriction-modification system, S subunit n=1 Tax=Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) RepID=F5YFT4_TREAZ
N-6 DNA methylase {ECO:0000313|EMBL:KKR67692.1}; TaxID=1618499 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA2_40_6.;"
SR-VP_26_10_2020_1_100CM_scaffold_5625425_5
unknown

Not on your lists

comp(2360..2926)
DNA (567bp) protein (189aa)
restriction modification system DNA specificity domain protein
Restriction modification system DNA specificity domain n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AC52
Uncharacterized protein {ECO:0000313|EMBL:KKN29681.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SR-VP_26_10_2020_1_100CM_scaffold_5625425_6

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comp(3138..4541)
DNA (1404bp) protein (468aa)
putative transcriptional regulator
Putative transcriptional regulator id=4447205 bin=GWC2_Planctomycete_KSU_39_26 species=Methanobacterium sp. genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
SR-VP_26_10_2020_1_100CM_scaffold_5625425_7
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(4849..6429)
DNA (1581bp) protein (527aa)
type I restriction-modification system, M subunit (EC:2.1.1.72)
N-6 DNA methylase id=4047390 bin=GWF2_Ignavibacteria_35_20 species=Anabaena variabilis genus=Anabaena taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
SR-VP_26_10_2020_1_100CM_scaffold_5625425_8
unknown

Not on your lists

6596..6973
DNA (378bp) protein (126aa)
glyoxalase
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JG35_9ARCH
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_5625425_9
RBG_13_Chloroflexi_60_13_curated, Chloroflexi, Bacteria

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7017..7541
DNA (525bp) protein (175aa)
hypothetical protein
Activator of Hsp90 ATPase 1 family protein id=3906339 bin=GWA2_Deltaproteo_65_63 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
Tax=RBG_13_Chloroflexi_60_13_curated
SR-VP_26_10_2020_1_100CM_scaffold_5625425_10

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7538..8113
DNA (576bp) protein (192aa)
bifunctional deaminase-reductase domain-containing protein
hypothetical protein Lbro5_02370 id=3043445 bin=GWC2_Nitrospirae-rel_56_14 species=Leptospira broomii genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=RBG_19FT_COMBO_Aminicenantes_59_29_curated
SR-VP_26_10_2020_1_100CM_scaffold_5625425_11
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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8110..8610
DNA (501bp) protein (167aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TK15_METAC
Putative glutathione S-transferase-related transmembrane protein {ECO:0000313|EMBL:AKB12223.1}; EC=2.5.1.18 {ECO:0000313|EMBL:AKB12223.1};; TaxID=523844 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina thermophila TM-1.;"
SR-VP_26_10_2020_1_100CM_scaffold_5625425_12
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

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8832..10598
DNA (1767bp) protein (589aa)
peptide ABC transporter substrate-binding protein
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NQE6_HALBP
Tax=RBG_16_Chloroflexi_50_9_curated
SR-VP_26_10_2020_1_100CM_scaffold_5625425_13
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

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10627..11592
DNA (966bp) protein (322aa)
dppB3; dipeptide/oligopeptide/nickel ABC transporter permease
Dipeptide/oligopeptide/nickel ABC transporter permease n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LGG3_9EURY
Tax=RBG_13_Chloroflexi_48_17_curated
SR-VP_26_10_2020_1_100CM_scaffold_5625425_14
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists

11659..12495
DNA (837bp) protein (279aa)
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=L9ZU23_9EURY
Tax=RBG_13_Chloroflexi_48_17_curated
SR-VP_26_10_2020_1_100CM_scaffold_5625425_15
unknown

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comp(13000..13236)
DNA (237bp) protein (79aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_5625425_16
unknown

Not on your lists

comp(13342..13449)
DNA (108bp) protein (36aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_5625425_17
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(13409..13819)
DNA (411bp) protein (137aa)
nucleic acid-binding protein, contains PIN domain
Probable ribonuclease VapC id=2184150 bin=GWB2_Nitrospirae_rel_47_37 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_5625425_18
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(13822..14052)
DNA (231bp) protein (77aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_5625425_19
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14212..15183
DNA (972bp) protein (324aa)
oligopeptide/dipeptide ABC transporter ATPase subunit
Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RT93_9CLOT
Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) {ECO:0000313|EMBL:CDF58488.1}; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="Thermobrachium celere DSM 8682.;"
SR-VP_26_10_2020_1_100CM_scaffold_5625425_20
RBG_16_Chloroflexi_58_8_curated, Chloroflexi, Bacteria

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15185..16138
DNA (954bp) protein (318aa)
oligopeptide/dipeptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8D225_HALOH
Tax=RBG_16_Chloroflexi_58_8_curated
SR-VP_26_10_2020_1_100CM_scaffold_5625425_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16491..18734
DNA (2244bp) protein (748aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9VXR5_9CYAN
PAS domain S-box {ECO:0000313|EMBL:KCZ70644.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_5625425_22
unknown

Not on your lists

18889..19794
DNA (906bp) protein (302aa)
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit E
Tetrahydromethanopterin S-methyltransferase subunit E n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXS5_METHD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_5625425_23
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

19794..20516
DNA (723bp) protein (241aa)
tetrahydromethanopterin S-methyltransferase, subunit D (EC:2.1.1.86)
Tetrahydromethanopterin S-methyltransferase subunit D n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E7Y4_METMS
Tetrahydromethanopterin S-methyltransferase subunit D {ECO:0000256|HAMAP-Rule:MF_01097}; EC=2.1.1.86 {ECO:0000256|HAMAP-Rule:MF_01097};; N5-methyltetrahydromethanopterin--coenzyme M methyltransferase subunit D {ECO:0000256|HAMAP-Rule:MF_01097}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_5625425_24
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

20513..21286
DNA (774bp) protein (258aa)
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit C
Tetrahydromethanopterin S-methyltransferase subunit C n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L005_METHD
Tetrahydromethanopterin S-methyltransferase subunit C {ECO:0000256|HAMAP-Rule:MF_01096}; EC=2.1.1.86 {ECO:0000256|HAMAP-Rule:MF_01096};; N5-methyltetrahydromethanopterin--coenzyme M methyltransferase subunit C {ECO:0000256|HAMAP-Rule:MF_01096}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_5625425_25
unknown

Not on your lists

21289..21618
DNA (330bp) protein (110aa)
tetrahydromethanopterin S-methyltransferase, subunit B
Tetrahydromethanopterin S-methyltransferase subunit B n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L1V0_METHD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_5625425_26
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

21619..22344
DNA (726bp) protein (242aa)
tetrahydromethanopterin S-methyltransferase subunit A (EC:2.1.1.86)
UPI0003D1A3B3 related cluster n=1 Tax=unknown RepID=UPI0003D1A3B3
Tetrahydromethanopterin S-methyltransferase subunit A {ECO:0000256|HAMAP-Rule:MF_01093}; EC=2.1.1.86 {ECO:0000256|HAMAP-Rule:MF_01093};; N5-methyltetrahydromethanopterin--coenzyme M methyltransferase subunit A {ECO:0000256|HAMAP-Rule:MF_01093}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_5625425_27
unknown

Not on your lists

22346..22570
DNA (225bp) protein (75aa)
tetrahydromethanopterin S-methyltransferase, subunit F
Tetrahydromethanopterin S-methyltransferase subunit F n=1 Tax=Methanolobus psychrophilus R15 RepID=K4ME80_9EURY
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_5625425_28
unknown

Not on your lists

22571..22828
DNA (258bp) protein (86aa)
tetrahydromethanopterin S-methyltransferase subunit G
UPI0003D1B7D2 related cluster n=1 Tax=unknown RepID=UPI0003D1B7D2
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_5625425_29
unknown

Not on your lists

22842..23792
DNA (951bp) protein (317aa)
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit H
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit H n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L001_METHD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_5625425_30
unknown

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23980..24978
DNA (999bp) protein (333aa)
ftsZ2; cell division protein FtsZ
Cell division protein FtsZ n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IKP2_NITGG
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying items 1-30 of 43 in total

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