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SR-VP_26_10_2020_1_100CM_scaffold_4316160

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2020_1_100CM_scaffold_4316160_1
unknown

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603..1166
DNA (564bp) protein (188aa)
GTP-binding protein HSR1-like protein
GTP-binding protein HSR1-related protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EAT1_METEZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_4316160_2
unknown

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1240..2469
DNA (1230bp) protein (410aa)
translation initiation factor IF-2 subunit gamma
Translation initiation factor 2 subunit gamma n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B8S3_METTP
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_4316160_3
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2466..2834
DNA (369bp) protein (123aa)
nucleotide-binding protein PInc
Nucleotide-binding protein PInc n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MCM3_9EURY
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_4316160_4
unknown

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2858..3511
DNA (654bp) protein (218aa)
DNA-directed RNA polymerase subunit E' (EC:2.7.7.6)
DNA-directed RNA polymerase, subunit E n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FS3_METBF
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_4316160_5
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3511..3696
DNA (186bp) protein (62aa)
DNA-directed RNA polymerase subunit E''
Transcription elongation factor Spt4 n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WQ76_METH6
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_4316160_6
unknown

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3713..4234
DNA (522bp) protein (174aa)
hypothetical protein
UPF0218 protein Mbur_2282 n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Y2282_METBU
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_4316160_7
unknown

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4234..4569
DNA (336bp) protein (112aa)
30S ribosomal protein S24E
30S ribosomal protein S24E n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=UPI0001D5AB56
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_4316160_8
unknown

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4882..5178
DNA (297bp) protein (99aa)
hypothetical protein
UPI0003D1A10D related cluster n=1 Tax=unknown RepID=UPI0003D1A10D
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_4316160_9
unknown

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5181..5618
DNA (438bp) protein (146aa)
archease family protein
Protein archease n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E9W6_METMS
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_4316160_10
unknown

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5730..6458
DNA (729bp) protein (243aa)
hypothetical protein
Putative uncharacterized protein id=3622954 bin=GWB1_Spirochaetes_59_5 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_4316160_11
unknown

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6546..6851
DNA (306bp) protein (102aa)
ArsR family transcriptional regulator
Transcriptional regulator, arsR family n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AFG9_PYRYC
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_4316160_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6845..7036
DNA (192bp) protein (64aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ73561.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_4316160_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7042..7704
DNA (663bp) protein (221aa)
hypothetical protein
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI00035C80BE
Glutaredoxin-like domain protein {ECO:0000313|EMBL:KCZ73562.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_4316160_14
unknown

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comp(7860..8168)
DNA (309bp) protein (103aa)
rpl12p; 50S ribosomal protein L12
50S ribosomal protein L12 n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PY50_METMA
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_4316160_15
unknown

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comp(8190..9224)
DNA (1035bp) protein (345aa)
rplP0; acidic ribosomal protein P0
UPI0003D1A882 related cluster n=1 Tax=unknown RepID=UPI0003D1A882
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_4316160_16
unknown

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comp(9225..9866)
DNA (642bp) protein (214aa)
rpl1P; 50S ribosomal protein L1P
50S ribosomal protein L1 n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=RL1_METBU
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_4316160_trna_1
unknown

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10202..10275
DNA (74bp)
transferRNA Phe
Displaying 17 items

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