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SR-VP_26_10_2020_1_100CM_scaffold_1927105

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2020_1_100CM_scaffold_1927105_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3..173)
DNA (171bp) protein (57aa)
pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit
Pyruvate ferredoxin oxidoreductase, delta subunit n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B9P0_METTP
2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family {ECO:0000313|EMBL:KCZ71494.1}; EC=1.2.7.1 {ECO:0000313|EMBL:KCZ71494.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1927105_2
unknown

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comp(170..715)
DNA (546bp) protein (182aa)
pyruvate ferredoxin oxidoreductase subunit gamma (EC:1.2.7.1)
Pyruvate synthase gamma chain n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12U51_METBU
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1927105_3
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(765..1556)
DNA (792bp) protein (264aa)
CAAX amino terminal protease
CAAX amino terminal protease family n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I6K1_METCZ
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_1927105_4
unknown

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comp(1787..2971)
DNA (1185bp) protein (395aa)
fructose-bisphosphate aldolase
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI0003775653
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1927105_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3105..3938
DNA (834bp) protein (278aa)
Proline dehydrogenase
Proline dehydrogenase n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KKF9_9ARCH
Proline dehydrogenase {ECO:0000313|EMBL:KCZ70759.1}; EC=1.5.5.2 {ECO:0000313|EMBL:KCZ70759.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1927105_6
unknown

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comp(3961..4836)
DNA (876bp) protein (292aa)
hypothetical protein
PAP2 superfamily protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VS23_CLOBI
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1927105_7
unknown

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comp(4890..5114)
DNA (225bp) protein (75aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WP54_METH6
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1927105_8
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5119..6288)
DNA (1170bp) protein (390aa)
coenzyme F420 hydrogenase, beta subunit
Coenzyme F420 hydrogenase, beta subunit n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MBE5_9EURY
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_1927105_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6356..7678
DNA (1323bp) protein (441aa)
cell surface protein
UPI0003D1C53C related cluster n=1 Tax=unknown RepID=UPI0003D1C53C
Parallel beta-helix repeat (Two copies) {ECO:0000313|EMBL:KCZ71230.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1927105_trna_1
unknown

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comp(7805..7888)
DNA (84bp)
transferRNA Ser
SR-VP_26_10_2020_1_100CM_scaffold_1927105_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(7919..8914)
DNA (996bp) protein (332aa)
putative tRNA pseudouridine synthase B
Probable tRNA pseudouridine synthase B n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WMQ1_METH6
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01081}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1927105_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8911..9357)
DNA (447bp) protein (149aa)
cmk; cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MAS8_9EURY
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS00054797}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00239};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS00054803};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00239}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1927105_12
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(9433..10029)
DNA (597bp) protein (199aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MD47_9EURY
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_1927105_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10022..10669)
DNA (648bp) protein (216aa)
Adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=KAD_METBF
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1927105_14
unknown

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comp(10886..11041)
DNA (156bp) protein (52aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q468A6_METBF
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1927105_15
unknown

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comp(11081..11362)
DNA (282bp) protein (94aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YZZ3_METPS
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 16 items

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