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SR-VP_26_10_2020_1_100CM_scaffold_3045114

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2020_1_100CM_scaffold_3045114_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1..462)
DNA (462bp) protein (154aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LE95_THEPS
Uncharacterized protein {ECO:0000313|EMBL:KCZ70384.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_3045114_2
unknown

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584..805
DNA (222bp) protein (74aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_3045114_3
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(846..1454)
DNA (609bp) protein (203aa)
hypothetical protein
UPI0003D1ACD3 related cluster n=1 Tax=unknown RepID=UPI0003D1ACD3
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_3045114_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1519..2424)
DNA (906bp) protein (302aa)
ADP-ribosylglycohydrolase superfamily
ADP-ribosylglycohydrolase superfamily n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WPW2_METH6
ADP-ribosylglycohydrolase {ECO:0000313|EMBL:KCZ72391.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_3045114_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2472..3842)
DNA (1371bp) protein (457aa)
nicotinate phosphoribosyltransferase
pncB; nicotinate phosphoribosyltransferase (EC:2.4.2.11); K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11] id=14425507 bin=bin1_lowGC species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=bin1_lowGC organism_group=Unknown_CP
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_3045114_6
unknown

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comp(4070..5350)
DNA (1281bp) protein (427aa)
4-aminobutyrate aminotransferase (EC:2.6.1.19)
Class III aminotransferase n=1 Tax=uncultured archaeon RepID=D1JBI7_9ARCH
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3045114_7
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(5357..6682)
DNA (1326bp) protein (442aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q1N7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CAJ73925.1}; TaxID=174633 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Kuenenia.;" source="Candidatus Kuenenia stuttgartiensis.;"
SR-VP_26_10_2020_1_100CM_scaffold_3045114_8
unknown

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comp(6694..8172)
DNA (1479bp) protein (493aa)
Aldehyde dehydrogenase
Probabe NAD-dependent aldehyde dehydrogenase n=1 Tax=uncultured archaeon RepID=D1JBI8_9ARCH
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3045114_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8421..9785)
DNA (1365bp) protein (455aa)
hypothetical protein
Putative phosphoglycerate mutase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q466M8_METBF
Phosphoglyceromutase {ECO:0000313|EMBL:KCZ72351.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_3045114_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(9838..10398)
DNA (561bp) protein (187aa)
Ham1-like protein
UPI0003D1B04E related cluster n=1 Tax=unknown RepID=UPI0003D1B04E
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_3045114_11
unknown

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comp(10429..11163)
DNA (735bp) protein (245aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W3X4_UNCMA
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3045114_12
unknown

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11264..12289
DNA (1026bp) protein (342aa)
methyltransferase
SAM-dependent methyltransferase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12TC9_METBU
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3045114_13
unknown

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12486..12884
DNA (399bp) protein (133aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_3045114_14
unknown

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12987..13595
DNA (609bp) protein (203aa)
ClpP class periplasmic serine protease
Peptidase S49 n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CPM0_9EURY
Marine sediment metagenome DNA, contig: S12H4_L00990 {ECO:0000313|EMBL:GAI83140.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SR-VP_26_10_2020_1_100CM_scaffold_3045114_15
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

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13823..14713
DNA (891bp) protein (297aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KIA8_9EURY
Tax=RBG_16_Chloroflexi_64_43_curated
SR-VP_26_10_2020_1_100CM_scaffold_3045114_16
unknown

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comp(14825..15646)
DNA (822bp) protein (274aa)
8-oxoguanine DNA glycosylase-like protein
8-oxoguanine DNA glycosylase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12WX0_METBU
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3045114_17
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(15759..16502)
DNA (744bp) protein (248aa)
multisensor signal transduction histidine kinase
UPI0003D1C7B3 related cluster n=1 Tax=unknown RepID=UPI0003D1C7B3
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_3045114_18
unknown

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comp(16499..16726)
DNA (228bp) protein (76aa)
PAS/PAC sensor hybrid histidine kinase
Multi-sensor hybrid histidine kinase id=3064963 bin=GWC1_Spirochaetes_27_15 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3045114_19
unknown

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comp(16743..16853)
DNA (111bp) protein (37aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_3045114_20
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(16907..17599)
DNA (693bp) protein (231aa)
RecA-superfamily ATPase implicated in signal transduction
RecA-superfamily ATPase implicated in signal transduction n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAV1_METMS
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_3045114_21
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(17615..18322)
DNA (708bp) protein (236aa)
RecA family ATPase
Predicted RecA-family ATPase n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W872_UNCMA
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_3045114_22
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(18386..19234)
DNA (849bp) protein (283aa)
Response regulator receiver
Response regulator receiver n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1Q7P4_METMZ
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_3045114_23
unknown

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comp(19251..19793)
DNA (543bp) protein (181aa)
nitroreductase
Nitroreductase n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8A840_THEID
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3045114_24
unknown

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comp(19798..20136)
DNA (339bp) protein (113aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3045114_25
unknown

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comp(20316..20468)
DNA (153bp) protein (51aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_3045114_26
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(20469..20987)
DNA (519bp) protein (173aa)
putative membrane protein
Uncharacterized protein id=5800436 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=CG_Delta_07
Displaying 26 items

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