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S10_scaffold_1137_curated

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S10_scaffold_1137_curated_1
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1..738
DNA (738bp) protein (246aa)
Conserved protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PTC9_METMA
dTDP-D-glucose 4,6-dehydratase {ECO:0000313|EMBL:AKB81621.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_1137_curated_2
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1106..3469
DNA (2364bp) protein (788aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AH0_METBF rbh
Uncharacterized protein {ECO:0000313|EMBL:AKB81622.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_1137_curated_3
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3822..6272
DNA (2451bp) protein (817aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AG9_METBF rbh
dTDP-D-glucose 4,6-dehydratase {ECO:0000313|EMBL:AKB81623.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
dTDP-D-glucose 4,6-dehydratase
S10_scaffold_1137_curated_4
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6368..7228
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AH1_METBF rbh
Uncharacterized protein {ECO:0000313|EMBL:AKB81624.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_1137_curated_5
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(7488..8705)
DNA (1218bp) protein (406aa)
2-isopropylmalate synthase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AH2_METBF rbh
Coenzyme B synthesis from 2-oxoglutarate: steps 1, 6, and 10 {ECO:0000313|EMBL:AKB81625.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Coenzyme B synthesis from 2-oxoglutarate: steps 1, 6, and 10
S10_scaffold_1137_curated_6
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9301..10128)
DNA (828bp) protein (276aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
NAD kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=PPNK_METBF rbh
S10_scaffold_1137_curated_7
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10130..10936)
DNA (807bp) protein (269aa)
Inositol-1-monophosphatase {ECO:0000313|EMBL:AKB81627.1}; EC=3.1.3.25 {ECO:0000313|EMBL:AKB81627.1};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Inositol-1-monophosphatase (EC:3.1.3.25)
D-fructose 1,6-bisphosphatase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AH4_METBF rbh
S10_scaffold_1137_curated_8
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11257..12273)
DNA (1017bp) protein (339aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00559, ECO:0000256|RuleBase:RU003388}; Short=GAPDH {ECO:0000256|HAMAP-Rule:MF_00559};; EC=1.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00559, ECO:0000256|RuleBase:RU003388};; NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00559}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
NAD(P)-dependent glyceraldehyde 3-phosphate dehydrogenase archaeal (EC:1.2.1.59)
Glyceraldehyde-3-phosphate dehydrogenase 1 n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=G3P1_METBF rbh
S10_scaffold_1137_curated_9
unknown

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12890..13018
DNA (129bp) protein (43aa)

This feature has no annotations

S10_scaffold_1137_curated_10
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12986..13174)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AH6_METBF
Uncharacterized protein {ECO:0000313|EMBL:AKB81629.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_1137_curated_11
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14846..15007
DNA (162bp) protein (54aa)
Conserved hypothetical membrane associated protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AH8_METBF
Putative membrane associated protein {ECO:0000313|EMBL:AKB81631.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
putative membrane associated protein
S10_scaffold_1137_curated_12
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15197..15592)
DNA (396bp) protein (132aa)
Conserved hypothetical membrane spanning protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AH9_METBF
Uncharacterized protein {ECO:0000313|EMBL:AKB81632.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_1137_curated_13
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16502..16933)
DNA (432bp) protein (144aa)
Uncharacterized protein {ECO:0000313|EMBL:KKH93628.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (Methanosarcina frisia).;"
S10_scaffold_1137_curated_14
Methanosarcina sp. Kolksee, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(17104..17856)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q467U6_METBF
Pentapeptide repeat family protein
Pentapeptide repeat family protein {ECO:0000313|EMBL:AKB47096.1}; TaxID=1434099 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. Kolksee.;"
Displaying 14 items

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