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SR-VP_0-2_scaffold_141_90813

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Displaying items 1-30 of 32 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_0-2_scaffold_141_90813_1
unknown

Not on your lists

237..632
DNA (396bp) protein (132aa)

This feature has no annotations

SR-VP_0-2_scaffold_141_90813_2
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

Not on your lists

649..804
DNA (156bp) protein (52aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ18320.1}; TaxID=1618331 species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA1_36_9.;"
SR-VP_0-2_scaffold_141_90813_3
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(923..2131)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LTU2_HALLT
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_0-2_scaffold_141_90813_4
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(2133..3398)
DNA (1266bp) protein (422aa)
UPI0003D1A5F6 related cluster n=1 Tax=unknown RepID=UPI0003D1A5F6
nucleic acid-binding OB-fold tRNA/helicase-type protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_90813_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

3604..4080
DNA (477bp) protein (159aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_90813_6
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(4114..4887)
DNA (774bp) protein (258aa)
Transcriptional regulator, MarR family n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E7M7_METMS
helix-turn-helix type 11 domain-containing protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_90813_7
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(4884..5393)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KX99_METHD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_90813_8
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(5598..6563)
DNA (966bp) protein (322aa)
Replication factor C small subunit n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KX85_METHD
DNA polymerase III, gamma/tau subunit
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_90813_9
unknown

Not on your lists

comp(6677..7099)
DNA (423bp) protein (141aa)
hypothetical protein
SR-VP_0-2_scaffold_141_90813_10
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

7472..8380
DNA (909bp) protein (303aa)
UPI0003D1C148 related cluster n=1 Tax=unknown RepID=UPI0003D1C148
ornithine carbamoyltransferase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_90813_trna_1
unknown

Not on your lists

8390..8474
DNA (85bp)
transferRNA Leu
SR-VP_0-2_scaffold_141_90813_11
unknown

Not on your lists

comp(9180..9635)
DNA (456bp) protein (152aa)

This feature has no annotations

SR-VP_0-2_scaffold_141_90813_12
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9953..10447)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WMZ4_METH6
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_0-2_scaffold_141_90813_13
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

10571..11029
DNA (459bp) protein (153aa)
UPI0003D1B463 related cluster n=1 Tax=unknown RepID=UPI0003D1B463
formylmethanofuran dehydrogenase, subunit G
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_90813_14
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

11039..12250
DNA (1212bp) protein (404aa)
UPI0003D1A226 related cluster n=1 Tax=unknown RepID=UPI0003D1A226
formylmethanofuran dehydrogenase, subunit B
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_90813_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12250..12663
DNA (414bp) protein (138aa)
Formylmethanofuran dehydrogenase subunit D {ECO:0000313|EMBL:KCZ71884.1}; EC=1.2.99.5 {ECO:0000313|EMBL:KCZ71884.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Molybdopterin dinucleotide-binding region n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E9L5_METEZ
molybdopterin dinucleotide-binding region
SR-VP_0-2_scaffold_141_90813_16
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

12717..13076
DNA (360bp) protein (120aa)
Cupin id=4932260 bin=GWC2_Nitrospirae_57_13 species=Nodularia spumigena genus=Nodularia taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
cupin
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_90813_17
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

13219..13701
DNA (483bp) protein (161aa)
hypothetical protein; K09129 hypothetical protein id=14425538 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
SR-VP_0-2_scaffold_141_90813_18
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

13701..14597
DNA (897bp) protein (299aa)
thrB; homoserine kinase (EC:2.7.1.39)
Homoserine kinase n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=KHSE_UNCMA
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_90813_trna_2
unknown

Not on your lists

14646..14719
DNA (74bp)
transferRNA Thr
SR-VP_0-2_scaffold_141_90813_19
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

15163..15714
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMK0_METZD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_90813_20
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(15721..16137)
DNA (417bp) protein (139aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_90813_21
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(16153..16689)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L0L4_METHD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_90813_22
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(16703..18646)
DNA (1944bp) protein (648aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MD31_9EURY
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_90813_23
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(18654..20963)
DNA (2310bp) protein (770aa)
ATPase, type IV secretory pathway VirB11 component like protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L1J2_METHD
ATPase, type IV secretory pathway VirB11 component like protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_90813_24
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

21190..22479
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TU69_METAC
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_90813_25
Methanolobus psychrophilus, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22568..23056)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MFR6_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV24868.1}; TaxID=1094980 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus psychrophilus R15.;"
SR-VP_0-2_scaffold_141_90813_26
Methanoculleus marisnigri, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(23080..24267)
DNA (1188bp) protein (396aa)
Metal-dependent phosphohydrolase, HD sub domain n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CSN0_METMJ
metal-dependent phosphohydrolase
Metal-dependent phosphohydrolase, HD sub domain {ECO:0000313|EMBL:ABN56380.1}; TaxID=368407 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1).;"
SR-VP_0-2_scaffold_141_90813_27
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

24316..24642
DNA (327bp) protein (109aa)
UPI0003D1BAE0 related cluster n=1 Tax=unknown RepID=UPI0003D1BAE0
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_90813_28
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24751..26178)
DNA (1428bp) protein (476aa)
DEXX-box ATPase n=1 Tax=uncultured archaeon GZfos14B8 RepID=Q64E59_9ARCH
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Displaying items 1-30 of 32 in total

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