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SR-VP_0-2_scaffold_141_49634

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Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_0-2_scaffold_141_49634_1
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(3..2066)
DNA (2064bp) protein (688aa)
Elongation factor 2 n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXB8_METHD
translation elongation factor aEF-2
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_49634_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(2264..3184)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8H2_METEZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_49634_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3228..3638)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E7Y3_METEZ
Putative membrane protein {ECO:0000313|EMBL:KCZ72256.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_0-2_scaffold_141_49634_4
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(3635..4195)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXK4_METFV
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_49634_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

4338..5132
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KWH7_METHD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_49634_6
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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5219..8080
DNA (2862bp) protein (954aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=SYL_METBU
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_49634_7
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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8158..8550
DNA (393bp) protein (131aa)
Roadblock/LC7 family protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQ29_ARCVS
Roadblock/LC7 family protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_49634_8
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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8565..10007
DNA (1443bp) protein (481aa)
Circadian clock protein kinase KaiC n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12V32_METBU
circadian clock protein KaiC
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_49634_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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10013..10294
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XL53_METZD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_49634_10
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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10291..10593
DNA (303bp) protein (101aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_49634_11
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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10599..11510
DNA (912bp) protein (304aa)
Phosphonate ABC transporter, periplasmic phosphonate-binding protein id=4791938 bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_49634_12
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

11507..14173
DNA (2667bp) protein (889aa)
Putative sensory transduction histidine kinase n=1 Tax=uncultured archaeon RepID=D1JCL2_9ARCH
PAS/PAC sensor signal transduction histidine kinase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_49634_13
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

14170..14553
DNA (384bp) protein (128aa)
Response regulator receiver n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MEM9_9EURY
response regulator receiver
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_49634_14
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

14604..15203
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MLV6_9EURY
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_49634_15
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

15379..16308
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TSX2_METAC
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_49634_16
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

16309..17073
DNA (765bp) protein (255aa)
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=RLME_METMA
ftsJ; methyltransferase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_49634_17
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

17185..17631
DNA (447bp) protein (149aa)
Alkylhydroperoxidase like protein, AhpD family n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EBD9_METEZ
alkylhydroperoxidase-like protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_49634_18
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(17657..18886)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YZX5_METPS
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_49634_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

19433..20293
DNA (861bp) protein (287aa)
Putative ABC transporter n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YVK1_METPS
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:KCZ72156.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
putative ABC transporter
SR-VP_0-2_scaffold_141_49634_20
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(20299..21075)
DNA (777bp) protein (259aa)
Probable cyclic pyranopterin monophosphate synthase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E961_METEZ
molybdenum cofactor biosynthesis protein A
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_49634_21
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(21215..21421)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q465M5_METBF
Ubiquitin-like small archaeal modifier protein SAMP2
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_49634_22
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(21424..21561)
DNA (138bp) protein (46aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_49634_23
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(21746..22792)
DNA (1047bp) protein (349aa)
UPI0003D1B632 related cluster n=1 Tax=unknown RepID=UPI0003D1B632
4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_49634_24
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

22918..24027
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q464W4_METBF
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_49634_trna_1
unknown

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24249..24338
DNA (90bp)
transferRNA Arg
SR-VP_0-2_scaffold_141_49634_25
CG_Delta_06, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24534..25145)
DNA (612bp) protein (204aa)
Conserved hypothetical membrane protein, DUF1282 family n=1 Tax=uncultured archaeon RepID=D1J908_9ARCH
hypothetical protein
Tax=CG_Delta_06
Displaying 26 items

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