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SR-VP_0-2_scaffold_141_1343649

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_0-2_scaffold_141_1343649_1
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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53..268
DNA (216bp) protein (72aa)
Putative snRNP Sm-like protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KY05_METHD
small nuclear ribonucleoprotein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_1343649_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

470..1870
DNA (1401bp) protein (467aa)
UPI0003D1ADD7 related cluster n=1 Tax=unknown RepID=UPI0003D1ADD7
amidophosphoribosyltransferase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_1343649_3
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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1921..2553
DNA (633bp) protein (211aa)
Small GTP-binding protein domain protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KWZ3_METHD
small GTP-binding protein domain protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_1343649_4
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

2558..2914
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KWN5_METHD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_1343649_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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2918..3358
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12ZG7_METBU
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_1343649_6
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(3352..3798)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1PTW7_METMZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_1343649_7
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

3880..4068
DNA (189bp) protein (63aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_1343649_8
unknown

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4224..5564
DNA (1341bp) protein (447aa)

This feature has no annotations

SR-VP_0-2_scaffold_141_1343649_9

Not on your lists

5603..5983
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JFM8_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH37336.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
SR-VP_0-2_scaffold_141_1343649_10
unknown

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5997..7055
DNA (1059bp) protein (353aa)

This feature has no annotations

SR-VP_0-2_scaffold_141_1343649_11
Mycobacterium kansasii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7242..8558)
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=U5WJX6_MYCKA
Uncharacterized protein {ECO:0000313|EMBL:AGZ49272.1}; TaxID=557599 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium kansasii ATCC 12478.;"
PE-PGRS family protein
SR-VP_0-2_scaffold_141_1343649_12
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

9145..11043
DNA (1899bp) protein (633aa)
Threonine--tRNA ligase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KUG7_METHD
threonyl-tRNA synthetase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_1343649_13
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

11071..11634
DNA (564bp) protein (188aa)
type 11 methyltransferase n=1 Tax=Geobacillus caldoxylosilyticus RepID=UPI0002E73140
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_1343649_14
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11674..12528)
DNA (855bp) protein (285aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAB0_GEOUR
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_0-2_scaffold_141_1343649_15
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(12557..14065)
DNA (1509bp) protein (503aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Type-2 serine--tRNA ligase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=SYS2_METBU
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_1343649_16
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

14207..14806
DNA (600bp) protein (200aa)
Aspartate/glutamate/uridylate kinase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MHJ5_9EURY
aspartate/glutamate/uridylate kinase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_1343649_17
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

15037..15303
DNA (267bp) protein (89aa)
Elongation factor 1-beta n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=EF1B_METBU
ef1B; elongation factor 1-beta
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_1343649_trna_1
unknown

Not on your lists

15322..15393
DNA (72bp)
transferRNA Ala
SR-VP_0-2_scaffold_141_1343649_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15553..16923)
DNA (1371bp) protein (457aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70782.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_0-2_scaffold_141_1343649_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

17251..17595
DNA (345bp) protein (115aa)
Smr domain-containing protein {ECO:0000313|EMBL:KCZ72242.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_0-2_scaffold_141_1343649_20
unknown

Not on your lists

17732..18943
DNA (1212bp) protein (404aa)

This feature has no annotations

SR-VP_0-2_scaffold_141_1343649_21
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

19051..20034
DNA (984bp) protein (328aa)
GTP-binding protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TQZ5_METAC
GTP-binding protein, gtp1/obg family
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_1343649_22
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

20325..20810
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7U3S2_9EURY
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_1343649_23
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

20883..22070
DNA (1188bp) protein (396aa)
Sep-tRNA:Cys-tRNA synthase (EC:2.5.1.-)
O-phospho-L-seryl-tRNA:Cys-tRNA synthase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAM2_METMS
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_1343649_24
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

22073..23089
DNA (1017bp) protein (339aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAM1_METMS
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_1343649_25
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

23199..23816
DNA (618bp) protein (206aa)
Putative uncharacterized protein PH1422 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=O50130_PYRHO
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_1343649_26
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(23835..24818)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BT14_METCG
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_1343649_27
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

25120..25263
DNA (144bp) protein (48aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_1343649_28
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(25270..26052)
DNA (783bp) protein (261aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12X83_METBU
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 29 items

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