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SR-VP_0-2_scaffold_141_2265037

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Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_0-2_scaffold_141_2265037_1
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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2..157
DNA (156bp) protein (52aa)
phosphate ABC transporter ATP-binding protein, PhoT family (EC:3.6.3.27)
Phosphate ABC transporter ATP-binding protein, PhoT family n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EB48_METMS
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_2265037_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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159..812
DNA (654bp) protein (218aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=uncultured archaeon RepID=Q2Y4E5_9ARCH
phosphate uptake regulator PhoU
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_2265037_3
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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882..1511
DNA (630bp) protein (210aa)
Putative uncharacterized protein n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CUC2_METMJ
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_2265037_4
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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1525..2526
DNA (1002bp) protein (334aa)
Putative Phosphate transporter family protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CV93_9ARCH
pit; putative inorganic phosphate transporter
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_2265037_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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2575..2868
DNA (294bp) protein (98aa)
Signal recognition particle 19 kDa protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EBK0_METEZ
Signal recognition particle SEC65 subunit
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_2265037_6
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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2865..3509
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MCP9_9EURY
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_2265037_7
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3512..3778)
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos27A8 RepID=Q64BL9_9ARCH
plasmid stabilization system
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_0-2_scaffold_141_2265037_8
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3775..4011)
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos27A8 RepID=Q64BL8_9ARCH
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_0-2_scaffold_141_2265037_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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4410..5846
DNA (1437bp) protein (479aa)
Menaquinone biosynthesis decarboxylase, SCO4490 family n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CJL4_DESK7
menaquinone biosynthesis decarboxylase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_2265037_10
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5815..9204
DNA (3390bp) protein (1130aa)
Uncharacterized protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MHX5_ALKOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW19407.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;"
SR-VP_0-2_scaffold_141_2265037_11
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(9301..10065)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=uncultured organism RepID=M1PQA8_9ZZZZ
small G protein, GTPase SAR1
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_2265037_12
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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10110..10988
DNA (879bp) protein (293aa)
4-hydroxybenzoate polyprenyltransferase
4-hydroxybenzoate polyprenyltransferase, putative id=3731002 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_0-2_scaffold_141_2265037_13
unknown

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comp(11834..12079)
DNA (246bp) protein (82aa)

This feature has no annotations

SR-VP_0-2_scaffold_141_2265037_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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12229..12639
DNA (411bp) protein (137aa)
Ribonuclease P protein component 4 {ECO:0000256|HAMAP-Rule:MF_00757}; Short=RNase P component 4 {ECO:0000256|HAMAP-Rule:MF_00757};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00757};; Rpp21 {ECO:0000256|HAMAP-Rule:MF_00757}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Ribonuclease P protein component 4 n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=RNP4_METBU
RNAse P, Rpr2/Rpp21 subunit
SR-VP_0-2_scaffold_141_2265037_15
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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12734..14872
DNA (2139bp) protein (713aa)
thioredoxin domain protein id=14426144 bin=bin1_lowGC species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_2265037_16
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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15051..16346
DNA (1296bp) protein (432aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JF96_9ARCH
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_2265037_17
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(16509..16817)
DNA (309bp) protein (103aa)
Large-conductance mechanosensitive channel n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HEH7_METFS
large-conductance mechanosensitive channel
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_2265037_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(17019..17672)
DNA (654bp) protein (218aa)
Putative Methyltransferase type 12 n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YY44_9BACT
Methyltransferase family protein {ECO:0000313|EMBL:KCZ71958.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
type 12 methyltransferase
SR-VP_0-2_scaffold_141_2265037_trna_1
unknown

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comp(17743..17816)
DNA (74bp)
transferRNA Val
SR-VP_0-2_scaffold_141_2265037_19
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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18143..18634
DNA (492bp) protein (164aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_0-2_scaffold_141_2265037_20
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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18744..20501
DNA (1758bp) protein (586aa)
UvrABC system protein C n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EBR0_METEZ
excinuclease ABC subunit C
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_2265037_21
unknown

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comp(20598..20714)
DNA (117bp) protein (39aa)

This feature has no annotations

SR-VP_0-2_scaffold_141_2265037_22
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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20961..21710
DNA (750bp) protein (250aa)
Hypothetical DUF75 protein n=1 Tax=Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) RepID=Q6L213_PICTO
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_2265037_23
Methanosarcina sp. 1.H.T.1A.1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(21786..23354)
DNA (1569bp) protein (523aa)
Superfamily I DNA and RNA helicase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8Q0V3_METMA
Uncharacterized protein {ECO:0000313|EMBL:KKH99424.1}; TaxID=1483602 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.T.1A.1.;"
DNA helicase IV
SR-VP_0-2_scaffold_141_2265037_24
unknown

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comp(23293..23646)
DNA (354bp) protein (118aa)

This feature has no annotations

Displaying 25 items

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