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SR-VP_0-2_scaffold_141_5131227

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Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_0-2_scaffold_141_5131227_1
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(1..120)
DNA (120bp) protein (40aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_5131227_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(269..805)
DNA (537bp) protein (179aa)
Nitroreductase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E724_METEZ
nitroreductase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_5131227_3
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(1201..1932)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T6S0_METSL
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_5131227_4
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(1996..2763)
DNA (768bp) protein (256aa)
Putative PAS/PAC sensor protein n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I8S2_METB6
PAS/PAC sensor protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_5131227_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists


comp(2931..3485)
DNA (555bp) protein (185aa)
Non-canonical purine NTP pyrophosphatase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MAS0_9EURY
Ham1-like protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_5131227_6
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(3854..5242)
DNA (1389bp) protein (463aa)
Aspartokinase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MGF9_9EURY
aspartate kinase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_5131227_7
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5533..6927
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PUX7_9RHOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL24328.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
SR-VP_0-2_scaffold_141_5131227_8
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(7073..7621)
DNA (549bp) protein (183aa)
Intracellular protease, PfpI family n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDZ7_GEOUR
PfpI family intracellular peptidase
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
SR-VP_0-2_scaffold_141_5131227_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7991..10642
DNA (2652bp) protein (884aa)
S-layer-related duplication domain protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8A7_METEZ
S-layer-related duplication domain {ECO:0000313|EMBL:KCZ71943.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
S-layer protein
SR-VP_0-2_scaffold_141_5131227_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11067..11285)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMF8_METZD
Uncharacterized protein {ECO:0000313|EMBL:KCZ73411.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_0-2_scaffold_141_5131227_11
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(11394..11936)
DNA (543bp) protein (181aa)
Peptide methionine sulfoxide reductase MsrA n=1 Tax=planctomycete KSU-1 RepID=I3IIY6_9PLAN
msrA; peptide methionine sulfoxide reductase MsrA
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_5131227_12
R_RIF_OD1_12_45_17b, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

12093..12815
DNA (723bp) protein (241aa)
cytochrome c biogenesis protein (EC:4.4.1.17); K06196 cytochrome c-type biogenesis protein id=5048645 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
cytochrome c biogenesis protein
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_12_45_17b_curated
SR-VP_0-2_scaffold_141_5131227_13
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

12812..13918
DNA (1107bp) protein (369aa)
Thiol-disulfide isomerase n=1 Tax=uncultured bacterium RepID=K1XH90_9BACT
thiol-disulfide isomerase-like thioredoxin
Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
SR-VP_0-2_scaffold_141_5131227_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14193..15092
DNA (900bp) protein (300aa)
ABC transporter related protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EAM4_METEZ
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:KCZ72722.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ABC transporter-like protein
SR-VP_0-2_scaffold_141_5131227_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15097..15879
DNA (783bp) protein (261aa)
Probable ABC transporter, permease protein n=1 Tax=uncultured archaeon RepID=D1JBJ8_9ARCH
Putative permease {ECO:0000313|EMBL:KCZ72723.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ABC-2 type transporter
SR-VP_0-2_scaffold_141_5131227_16
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

16353..17384
DNA (1032bp) protein (344aa)
Iron sulfur domain-containing, CDGSH-type n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T7F7_METSL
iron sulfur domain-containing, CDGSH-type
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_5131227_17
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17659..18186)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8THH7_METAC
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_0-2_scaffold_141_5131227_18
Smithella sp. SCADC, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18301..19788)
DNA (1488bp) protein (496aa)
N-6 DNA methylase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XKJ7_METZD
DNA methyltransferase {ECO:0000313|EMBL:KFO66922.1}; TaxID=1499107 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SCADC.;"
N-6 DNA methylase
SR-VP_0-2_scaffold_141_5131227_19
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(19854..20186)
DNA (333bp) protein (111aa)
DNA polymerase, beta-like region id=4476356 bin=GWC2_Syntrophobacterales_56_13 species=Methanoregula formicica genus=Methanoregula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
putative nucleotidyltransferase
Tax=CG_Elusi_05
SR-VP_0-2_scaffold_141_5131227_20
Methanosarcina lacustris, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20192..21706)
DNA (1515bp) protein (505aa)
Type I restriction-modification system, specificity subunit S (EC:3.1.21.3)
Type I restriction-modification system, specificity subunit S {ECO:0000313|EMBL:AKB74989.1}; EC=3.1.21.3 {ECO:0000313|EMBL:AKB74989.1};; TaxID=1434111 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina lacustris Z-7289.;"
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037E6205
SR-VP_0-2_scaffold_141_5131227_21
unknown

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comp(21703..22314)
DNA (612bp) protein (204aa)

This feature has no annotations

SR-VP_0-2_scaffold_141_5131227_22
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(22734..22961)
DNA (228bp) protein (76aa)
DNA polymerase beta domain protein region n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KN03_ARCVS
DNA polymerase beta domain-containing protein
DNA polymerase beta domain protein region {ECO:0000313|EMBL:AEA47279.1}; TaxID=693661 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus veneficus (strain DSM 11195 / SNP6).;"
SR-VP_0-2_scaffold_141_5131227_23

Not on your lists

comp(22958..25714)
DNA (2757bp) protein (919aa)
Putative type I restriction enzyme, res subunit n=1 Tax=uncultured archaeon RepID=D1JFQ5_9ARCH
Putative type I restriction enzyme, res subunit {ECO:0000313|EMBL:CBH37363.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
type I site-specific deoxyribonuclease
SR-VP_0-2_scaffold_141_5131227_24
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

26076..26369
DNA (294bp) protein (98aa)
Putative uncharacterized protein n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D529_METSW
Uncharacterized protein {ECO:0000313|EMBL:KCZ71409.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_0-2_scaffold_141_5131227_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(26415..26618)
DNA (204bp) protein (68aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70596.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_0-2_scaffold_141_5131227_26
RBG_16_OP11_Woesebacteria_34_12_curated, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(26672..27082)
DNA (411bp) protein (137aa)
mce; methylmalonyl-CoA epimerase (EC:5.1.99.1)
Methylmalonyl-CoA epimerase n=1 Tax=Bacillus megaterium (strain DSM 319) RepID=D5DLB5_BACMD
Tax=RBG_16_OP11_Woesebacteria_34_12_curated
SR-VP_0-2_scaffold_141_5131227_27
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

27467..27754
DNA (288bp) protein (96aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_5131227_28
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(27765..27974)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GHV0_METPE
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_0-2_scaffold_141_5131227_29
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(27992..28729)
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWV9_RUBXD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_5131227_30
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(28731..30035)
DNA (1305bp) protein (435aa)
DNA polymerase LigD, ligase domain protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KNL8_ARCVS
DNA polymerase LigD, ligase domain-containing protein
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 30 items

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