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SR-VP_0-2_scaffold_141_5713285

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_0-2_scaffold_141_5713285_1
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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1..387
DNA (387bp) protein (129aa)
30S ribosomal protein S6e n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IAM3_METCZ
rps6e; 30D ribosomal protein S6E
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_5713285_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(444..791)
DNA (348bp) protein (116aa)
UPI0003D1A58D related cluster n=1 Tax=unknown RepID=UPI0003D1A58D
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_5713285_3
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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893..1333
DNA (441bp) protein (147aa)
Putative thioredoxin n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0N7K0_DESTT
thioredoxin
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_0-2_scaffold_141_5713285_4
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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1343..2587
DNA (1245bp) protein (415aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium RepID=B6EWU8_9BACT
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_5713285_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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2590..3354
DNA (765bp) protein (255aa)
Cytochrome c-type biogenesis protein CcdA n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JIV3_HALVA
ccdA; cytochrome c-type biogenesis protein CcdA
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_5713285_6
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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3356..4750
DNA (1395bp) protein (465aa)
4Fe-4S ferredoxin id=14429178 bin=bin3_NC10 species=Deinococcus sp. 2009 genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_5713285_7
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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4871..5353
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DXN2_THIND
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_5713285_8
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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5355..7700
DNA (2346bp) protein (782aa)
Cytochrome c-type biogenesis protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QT27_9EURY
ccmF1; cytochrome c-type biogenesis protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_5713285_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7734..9017
DNA (1284bp) protein (428aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Tryptophan--tRNA ligase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MG42_9EURY
tryptophanyl-tRNA synthetase
SR-VP_0-2_scaffold_141_5713285_10
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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9069..9290
DNA (222bp) protein (74aa)
id=3436219 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_0-2_scaffold_141_5713285_11
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9438..10679)
DNA (1242bp) protein (414aa)
Uncharacterized protein {ECO:0000313|EMBL:KHD08921.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
SR-VP_0-2_scaffold_141_5713285_12
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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11028..12773
DNA (1746bp) protein (582aa)
UPI0003D1BF38 related cluster n=1 Tax=unknown RepID=UPI0003D1BF38
glycyl-tRNA synthetase, dimeric type
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_5713285_13
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(13130..14026)
DNA (897bp) protein (299aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12WE3_METBU
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_5713285_14
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(14184..15080)
DNA (897bp) protein (299aa)
Pyridoxal biosynthesis lyase PdxS n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EB26_METMS
pyridoxal phosphate synthase yaaD subunit
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_5713285_15
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(15335..16138)
DNA (804bp) protein (268aa)
Putative DNA repair photolyase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I9L3_METCZ
DNA repair photolyase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_5713285_16
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(16168..17424)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W0F0_UNCMA
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_5713285_17
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

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comp(17500..18141)
DNA (642bp) protein (214aa)
Flavoredoxin id=2636707 bin=GWC2_CP_Nitrospirae-rel_42_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
Tax=RBG_16_Planctomycetes_64_12_curated
SR-VP_0-2_scaffold_141_5713285_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18211..18405
DNA (195bp) protein (65aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72717.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_0-2_scaffold_141_5713285_19
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

18515..19135
DNA (621bp) protein (207aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_5713285_20
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(19507..20871)
DNA (1365bp) protein (455aa)
16S rRNA m(5)C 967 methyltransferase id=3904934 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
sun protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_5713285_21
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(20858..21439)
DNA (582bp) protein (194aa)
ZPR1-like zinc finger protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MFW5_9EURY
ZPR1-like zinc finger protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_5713285_22
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(21436..21645)
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12ZC8_METBU
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 22 items

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