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SR-VP_26_10_2019_2_100cm_scaffold_1701

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_1701_1
unknown

Not on your lists

88..852
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=uncultured organism RepID=M1PQA8_9ZZZZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1701_2
unknown

Not on your lists

comp(853..2295)
DNA (1443bp) protein (481aa)
Menaquinone biosynthesis decarboxylase, SCO4490 family n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CJL4_DESK7
menaquinone biosynthesis decarboxylase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1701_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2295..2531)
DNA (237bp) protein (79aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71656.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_1701_4
unknown

Not on your lists

comp(2861..3697)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003722246
integrase family protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1701_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4022..4360)
DNA (339bp) protein (113aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70990.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Uncharacterized protein id=4301266 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1701_6
unknown

Not on your lists

4483..4989
DNA (507bp) protein (169aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Probable deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Methanosarcina mazei RepID=DUT_METMA
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1701_7
unknown

Not on your lists

comp(5087..5281)
DNA (195bp) protein (65aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1701_8
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5459..6919)
DNA (1461bp) protein (487aa)
UPI0003D1A1A1 related cluster n=1 Tax=unknown RepID=UPI0003D1A1A1
Dolichyl-phosphate-mannose-protein mannosyltransferase {ECO:0000313|EMBL:ETA67437.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus tindarius DSM 2278.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1701_9
unknown

Not on your lists

7053..7496
DNA (444bp) protein (148aa)
CoB/CoM heterodisulfide reductase subunit C (EC:1.8.98.1)
CoB--CoM heterodisulfide reductase, subunit C n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KV46_METHD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1701_10
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7493..8389
DNA (897bp) protein (299aa)
CoB/CoM heterodisulfide reductase subunit B n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MC31_9EURY
CoB/CoM heterodisulfide reductase subunit B
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_1701_11
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8581..9009
DNA (429bp) protein (143aa)
peptidyl-prolyl isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I4A6_DESAP
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_1701_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9084..9641
DNA (558bp) protein (186aa)
Putative archaeoflavoprotein n=1 Tax=uncultured archaeon RepID=D1JFJ4_9ARCH
Archaeoflavoprotein AfpA {ECO:0000313|EMBL:KCZ70315.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
archaeoflavoprotein AfpA
SR-VP_26_10_2019_2_100cm_scaffold_1701_13
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9645..10175)
DNA (531bp) protein (177aa)
Phosphodiesterase, MJ0936 family n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XLS0_METZD
phosphodiesterase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_1701_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10201..11535)
DNA (1335bp) protein (445aa)
Putative uncharacterized protein n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=Q5JHM5_THEKO
Putative GTPase {ECO:0000313|EMBL:KCZ72227.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1701_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11598..13271)
DNA (1674bp) protein (558aa)
UPI0003D1C6D3 related cluster n=1 Tax=unknown RepID=UPI0003D1C6D3
Protein-export membrane protein SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Protein-export membrane protein SecD
SR-VP_26_10_2019_2_100cm_scaffold_1701_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13268..14206)
DNA (939bp) protein (313aa)
Protein-export membrane protein SecF n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L1H3_METHD
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
preprotein translocase subunit SecF
SR-VP_26_10_2019_2_100cm_scaffold_1701_17
Thermoplasma acidophilum, Thermoplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

14544..15668
DNA (1125bp) protein (375aa)
Probable potassium channel protein related protein n=1 Tax=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) RepID=Q9HIA8_THEAC
potassium channel protein
Probable potassium channel protein related protein {ECO:0000313|EMBL:CAC12553.1}; TaxID=273075 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Thermoplasmataceae; Thermoplasma.;" source="Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 /; NBRC 15155 / AMRC-C165).;"
SR-VP_26_10_2019_2_100cm_scaffold_1701_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15682..16716)
DNA (1035bp) protein (345aa)
Pyruvate formate lyase activating protein-like uncharacterized Fe-S protein {ECO:0000313|EMBL:KCZ72106.1}; EC=1.97.1.4 {ECO:0000313|EMBL:KCZ72106.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Radical SAM domain protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EA01_METMS
radical SAM protein
SR-VP_26_10_2019_2_100cm_scaffold_1701_19
unknown

Not on your lists

comp(16726..18258)
DNA (1533bp) protein (511aa)
Radical SAM domain protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EAI9_METEZ
radical SAM domain-containing protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1701_20
unknown

Not on your lists

18380..18610
DNA (231bp) protein (77aa)
Transcriptional regulator, AsnC family n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B6R5_METTP
AsnC family transcriptional regulator
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1701_21
unknown

Not on your lists

18621..20471
DNA (1851bp) protein (617aa)
Type 2 DNA topoisomerase 6 subunit B n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MG81_9EURY
DNA topoisomerase VI subunit B
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1701_22
unknown

Not on your lists

20468..21619
DNA (1152bp) protein (384aa)
Type 2 DNA topoisomerase 6 subunit A n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MIQ8_9EURY
DNA topoisomerase VI subunit A
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1701_23
unknown

Not on your lists

21699..22271
DNA (573bp) protein (191aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_1701_24
Arcobacter butzleri, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

22268..23506
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Arcobacter butzleri JV22 RepID=E6L7B3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EFU68734.1}; TaxID=888827 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter butzleri JV22.;"
SR-VP_26_10_2019_2_100cm_scaffold_1701_25
RBG_16_OP11_Levybacteria_35_11_curated, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(23738..24244)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WQ15_METH6
hypothetical protein
Tax=RBG_16_OP11_Levybacteria_35_11_curated
SR-VP_26_10_2019_2_100cm_scaffold_1701_26
unknown

Not on your lists

comp(24234..24458)
DNA (225bp) protein (75aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_1701_27
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

24650..24856
DNA (207bp) protein (69aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Displaying 27 items

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