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SR-VP_26_10_2019_2_100cm_scaffold_7200

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_7200_1
unknown

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1..372
DNA (372bp) protein (124aa)
Osmosensitive K+ channel histidine kinase KdpD (EC:2.7.3.-)
UPI00020A979F related cluster id=1836166 bin=GWE2_RBX1_39_32 species=Thermodesulfobium narugense genus=Thermodesulfobium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_7200_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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484..1032
DNA (549bp) protein (183aa)
Rubrerythrin n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1PAM6_METMZ
Rubrerythrin {ECO:0000313|EMBL:KCZ70936.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Rubrerythrin
SR-VP_26_10_2019_2_100cm_scaffold_7200_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1045..1251
DNA (207bp) protein (69aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ73651.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_7200_4
unknown

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1299..1688
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PZZ6_METMA
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_7200_5
unknown

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comp(1685..2881)
DNA (1197bp) protein (399aa)
S-adenosylmethionine synthase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MDQ5_9EURY
S-adenosylmethionine synthetase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_7200_6
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2990..3913
DNA (924bp) protein (308aa)
UPI0003D1B04F related cluster n=1 Tax=unknown RepID=UPI0003D1B04F
wyosine biosynthesis protein TYW1
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_7200_7
unknown

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3956..4654
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KTD0_METHD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_7200_8
unknown

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4651..5745
DNA (1095bp) protein (365aa)
UPI0003D1C4C2 related cluster n=1 Tax=unknown RepID=UPI0003D1C4C2
condensin subunit ScpB
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_7200_9
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5759..6271)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RGZ9_METP4
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_7200_10
unknown

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comp(6383..6652)
DNA (270bp) protein (90aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_7200_11
unknown

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6813..7421
DNA (609bp) protein (203aa)
Protein AF_1969 n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=Y1969_ARCFU
uncharacterized protein family
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_7200_12
unknown

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7449..7841
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos37D1 RepID=Q648J5_9ARCH
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_7200_13
unknown

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7897..8046
DNA (150bp) protein (50aa)
50S ribosomal protein L40e n=2 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=RL40_METAC
rpl40e; 50S ribosomal protein L40
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_7200_14
unknown

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8052..8798
DNA (747bp) protein (249aa)
Geranylgeranylglyceryl phosphate synthase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KT38_METHD
phosphoglycerol geranylgeranyltransferase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_7200_15
unknown

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comp(8805..9098)
DNA (294bp) protein (98aa)
Putative nucleoside-diphosphate sugar epimerase id=4518689 bin=GWF2_Syntrophobacterales_56_9 species=Desulfobacter postgatei genus=Desulfobacter taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
NAD-dependent epimerase/dehydratase
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 15 items

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