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SR-VP_26_10_2019_2_100cm_scaffold_2272

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_2272_1
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2..253
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XU46_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP35881.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SR-VP_26_10_2019_2_100cm_scaffold_2272_2
unknown

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comp(296..2833)
DNA (2538bp) protein (846aa)
Cation transport ATPase
Cation transport ATPase id=2148273 bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2272_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3246..4040
DNA (795bp) protein (265aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos1D1 RepID=Q64C92_9ARCH
Putative transcriptional regulator {ECO:0000313|EMBL:KCZ72386.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2272_4
Palaeococcus pacificus, Palaeococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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4006..4935
DNA (930bp) protein (310aa)
UbiA prenyltransferase n=1 Tax=Thermococcus onnurineus (strain NA1) RepID=B6YU95_THEON
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF69788.1}; TaxID=1343739 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Palaeococcus.;" source="Palaeococcus pacificus DY20341.;"
SR-VP_26_10_2019_2_100cm_scaffold_2272_5
unknown

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comp(4943..7813)
DNA (2871bp) protein (957aa)
Leucine--tRNA ligase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MDE3_9EURY
leuS; leucyl-tRNA synthetase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2272_6
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(7847..9967)
DNA (2121bp) protein (707aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46F56_METBF
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_2272_7
unknown

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10148..10285
DNA (138bp) protein (46aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2272_8
unknown

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10442..10564
DNA (123bp) protein (41aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2272_9
unknown

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comp(10829..12412)
DNA (1584bp) protein (528aa)
ATPase-like protein n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7J743_METBM
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2272_10
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(12568..13281)
DNA (714bp) protein (238aa)
Glycosyltransferase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TJC0_METAC
glycosyltransferase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_2272_11
unknown

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comp(13469..13627)
DNA (159bp) protein (53aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2272_12
unknown

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comp(13697..14539)
DNA (843bp) protein (281aa)
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TT54_METAC
hpcE; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2272_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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14625..14804
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XNR8_METZD
Uncharacterized protein {ECO:0000313|EMBL:KCZ70319.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2272_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14788..15069
DNA (282bp) protein (94aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70318.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_2272_15
unknown

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15157..15543
DNA (387bp) protein (129aa)
purE; phosphoribosylaminoimidazole carboxylase catalytic subunit PurE (EC:5.4.99.18)
Phosphoribosylaminoimidazole carboxylase, PurE protein n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I597_METCZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2272_16

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15701..17962
DNA (2262bp) protein (754aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LXR0_HALO1
peptidase S8/S53 subtilisin kexin sedolisin
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
SR-VP_26_10_2019_2_100cm_scaffold_2272_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18092..18526)
DNA (435bp) protein (145aa)
Universal stress protein UspA-like protein {ECO:0000313|EMBL:KCZ70694.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_2272_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18523..19011)
DNA (489bp) protein (163aa)
Ni,Fe-hydrogenase III small subunit {ECO:0000313|EMBL:KCZ70695.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Ni,Fe-hydrogenase III small subunit
NADH ubiquinone oxidoreductase 20 kDa subunit id=3114604 bin=GWA2_Ignavibacteria_55_11 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
SR-VP_26_10_2019_2_100cm_scaffold_2272_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19008..19346)
DNA (339bp) protein (113aa)
NADH dehydrogenase subunit I n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RGG5_MOOTA
NADH:ubiquinone oxidoreductase chain I-like protein {ECO:0000313|EMBL:KCZ70696.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
formate hydrogenlyase complex iron-sulfur subunit
SR-VP_26_10_2019_2_100cm_scaffold_2272_20
unknown

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comp(19356..20594)
DNA (1239bp) protein (413aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036597A3
hydrogenase, large subunit-like protein (HycE-like)
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 20 items

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