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SR-VP_26_10_2019_2_100cm_scaffold_2483

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_2483_1
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(106..3357)
DNA (3252bp) protein (1084aa)
UPI0003D1C669 related cluster n=1 Tax=unknown RepID=UPI0003D1C669
S-layer-related duplication domain protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_2483_2
unknown

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comp(3521..4108)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7LIU4_METBM
tRNA threonylcarbamoyl adenosine modification protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2483_3
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4365..4601)
DNA (237bp) protein (79aa)
Ferredoxin n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PVY1_METMA
ferredoxin
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_2483_4
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4640..5737)
DNA (1098bp) protein (366aa)
UPI0003D1A876 related cluster n=1 Tax=unknown RepID=UPI0003D1A876
Tubulin/FtsZ GTPase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_2483_5
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5745..6887)
DNA (1143bp) protein (381aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_2483_6
unknown

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comp(6939..8756)
DNA (1818bp) protein (606aa)
Probable potassium transport system protein kup n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=KUP_METAC
kup; potassium uptake protein Kup
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2483_7
unknown

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comp(8871..10007)
DNA (1137bp) protein (379aa)
sulfate adenylyltransferase (EC:2.7.7.4)
Sulfate adenylyltransferase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8V7_METEZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2483_8
unknown

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comp(10039..10758)
DNA (720bp) protein (240aa)
phosphoadenylylsulfate reductase (thioredoxin) (EC:1.8.4.9 1.8.4.8)
Phosphoadenylylsulfate reductase (Thioredoxin) n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAM7_METMS
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2483_9
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(10779..11636)
DNA (858bp) protein (286aa)
Sulfite reductase, beta subunit n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TKG8_METAC
sulfite reductase subunit beta
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_2483_10
unknown

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11791..12777
DNA (987bp) protein (329aa)
UPI0003D1A852 related cluster n=1 Tax=unknown RepID=UPI0003D1A852
alanine dehydrogenase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2483_11

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comp(12784..13224)
DNA (441bp) protein (147aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
SR-VP_26_10_2019_2_100cm_scaffold_2483_12
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(13574..14530)
DNA (957bp) protein (319aa)
UPI0003D1A60F related cluster n=1 Tax=unknown RepID=UPI0003D1A60F
Uncharacterized protein {ECO:0000313|EMBL:ETA67573.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus tindarius DSM 2278.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2483_13
unknown

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comp(14530..14703)
DNA (174bp) protein (58aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2483_14
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14795..17596)
DNA (2802bp) protein (934aa)
Topoisomerase DNA-binding C4 zinc finger domain protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VTK8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJS50642.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
DNA topoisomerase I
SR-VP_26_10_2019_2_100cm_scaffold_2483_15
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17593..18534)
DNA (942bp) protein (314aa)
Benzoyl-CoA reductase subunit badE {ECO:0000313|EMBL:GAO53096.1}; EC=1.3.7.8 {ECO:0000313|EMBL:GAO53096.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
2-hydroxyglutaryl-CoA dehydratase n=1 Tax=Asticcacaulis sp. AC460 RepID=V4PLX4_9CAUL
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2483_16
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18562..19434)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037A35DA
2-hydroxyglutaryl-CoA dehydratase D-component
2-hydroxyglutaryl-CoA dehydratase D-component {ECO:0000313|EMBL:ADL01727.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
Displaying 16 items

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