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SR-VP_26_10_2019_2_100cm_scaffold_6193

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_6193_1
Smithella sp. SC_K08D17, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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2..163
DNA (162bp) protein (54aa)
Transposase n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BW13_METCG
transposase
Integrase {ECO:0000313|EMBL:KIE18426.1}; Flags: Fragment;; TaxID=1487949 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SC_K08D17.;"
SR-VP_26_10_2019_2_100cm_scaffold_6193_2
unknown

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169..321
DNA (153bp) protein (51aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_6193_3
Methanolacinia petrolearia, Methanolacinia, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(358..903)
DNA (546bp) protein (182aa)
HNH endonuclease n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RF51_METP4
HNH endonuclease
HNH endonuclease {ECO:0000313|EMBL:ADN37295.1}; TaxID=679926 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanolacinia.;" source="Methanolacinia petrolearia (strain DSM 11571 / OCM 486 / SEBR 4847); (Methanoplanus petrolearius).;"
SR-VP_26_10_2019_2_100cm_scaffold_6193_4
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1262..1630)
DNA (369bp) protein (123aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_6193_5
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1623..1892)
DNA (270bp) protein (90aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_6193_6
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(1978..2241)
DNA (264bp) protein (88aa)
Putative toxin RelE4 n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=RELE4_METJA id=5103771 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=BJP_IG2158_Thermoplasmatales_53_16
SR-VP_26_10_2019_2_100cm_scaffold_6193_7
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(2243..2476)
DNA (234bp) protein (78aa)
hypothetical protein id=5046756 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=BJP_IG2158_Thermoplasmatales_53_16
SR-VP_26_10_2019_2_100cm_scaffold_6193_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2573..5503)
DNA (2931bp) protein (977aa)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formylglycinamide ribonucleotide amidotransferase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; Glutamine amidotransferase PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Phosphoribosylformylglycinamidine synthase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LPP3_SYNAS
SR-VP_26_10_2019_2_100cm_scaffold_6193_9
unknown

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comp(5500..6384)
DNA (885bp) protein (295aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_6193_10
Methanosarcina lacustris, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(6350..7186)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00036D769C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB74970.1}; TaxID=1434111 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina lacustris Z-7289.;"
SR-VP_26_10_2019_2_100cm_scaffold_6193_11
unknown

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7309..7641
DNA (333bp) protein (111aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_6193_12
unknown

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7847..7999
DNA (153bp) protein (51aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_6193_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8026..8262)
DNA (237bp) protein (79aa)
6-pyruvoyl-tetrahydropterin synthase {ECO:0000313|EMBL:KCZ71189.1}; EC=4.2.3.12 {ECO:0000313|EMBL:KCZ71189.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Putative uncharacterized protein n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RG33_METVM
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_6193_14
Methanotorris formicicus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

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8352..8786
DNA (435bp) protein (145aa)
HEPN domain protein n=1 Tax=Methanotorris formicicus Mc-S-70 RepID=H1KX83_9EURY
HEPN domain protein {ECO:0000313|EMBL:EHP88514.1}; TaxID=647171 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanotorris.;" source="Methanotorris formicicus Mc-S-70.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_6193_15
unknown

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8755..9210
DNA (456bp) protein (152aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_6193_16
unknown

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comp(9240..9719)
DNA (480bp) protein (160aa)
Putative uncharacterized protein n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RG33_METVM
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_6193_17
unknown

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9952..11127
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W0F0_UNCMA
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_6193_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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11167..11964
DNA (798bp) protein (266aa)
Putative DNA repair photolyase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I9L3_METCZ
DNA repair photolyase {ECO:0000313|EMBL:KCZ72504.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_6193_19
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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12244..12735
DNA (492bp) protein (164aa)
pyruvate flavodoxin/ferredoxin oxidoreductase-like protein; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] id=18248534 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Displaying 19 items

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