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SR-VP_26_10_2019_2_100cm_scaffold_6456

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_6456_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(47..421)
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos37B2 RepID=Q648N9_9ARCH
Putative transcriptional regulator {ECO:0000313|EMBL:KCZ71478.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
transcriptional regulator, TrmB
SR-VP_26_10_2019_2_100cm_scaffold_6456_2
unknown

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580..1485
DNA (906bp) protein (302aa)
Branched chain amino acid aminotransferase apoenzyme n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MCM0_9EURY
branched chain amino acid aminotransferase apoenzyme
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_6456_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1488..1694)
DNA (207bp) protein (69aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71476.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_6456_4
unknown

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comp(1768..2577)
DNA (810bp) protein (270aa)
Cobalt ABC transporter permease protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12V43_METBU
cobalt ABC transporter CbiQ, inner membrane subunit
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_6456_5
unknown

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comp(2579..3403)
DNA (825bp) protein (275aa)
Putative ABC transporter ATP-binding protein MM_0887 n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Y887_METMA
ATPase component NikO of energizing module of nickel ECF transporter
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_6456_6
unknown

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comp(3400..3528)
DNA (129bp) protein (43aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_6456_7
unknown

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comp(3525..4457)
DNA (933bp) protein (311aa)
Cobalamin (Vitamin B12) biosynthesis CbiM protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZ62_METFV
Substrate-specific component NikM of nickel ECF transporter
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_6456_8
unknown

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comp(4923..5759)
DNA (837bp) protein (279aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_6456_9
unknown

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comp(5871..6776)
DNA (906bp) protein (302aa)
Histone deacetylase family protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WN83_METH6
Histone deacetylase family protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_6456_10
unknown

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comp(6983..7381)
DNA (399bp) protein (133aa)
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B805_METTP
pyridoxamine 5'-phosphate oxidase-related, FMN-binding
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_6456_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7502..8794
DNA (1293bp) protein (431aa)
Pyruvate carboxyltransferase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MCQ2_9EURY
Isopropylmalate/homocitrate/citramalate synthase {ECO:0000313|EMBL:KCZ72822.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
pyruvate carboxyltransferase
SR-VP_26_10_2019_2_100cm_scaffold_6456_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(9072..9629)
DNA (558bp) protein (186aa)
Inosine monophosphate dehydrogenase n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1Q6D1_METMZ
Putative transcriptional regulator {ECO:0000313|EMBL:KCZ71528.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
inosine monophosphate dehydrogenase
Displaying 12 items

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