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SR-VP_26_10_2019_2_100cm_scaffold_1066

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_1066_1
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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152..1783
DNA (1632bp) protein (544aa)
cas3; CRISPR-associated nuclease/helicase Cas3 (EC:3.1.-.-)
CRISPR-associated nuclease/helicase Cas3 {ECO:0000313|EMBL:CEA12447.1}; EC=3.1.-.- {ECO:0000313|EMBL:CEA12447.1};; TaxID=2162 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium formicicum.;"
CRISPR-associated nuclease/helicase Cas3 n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=CAS3_METTH
SR-VP_26_10_2019_2_100cm_scaffold_1066_2
unknown

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comp(2226..3416)
DNA (1191bp) protein (397aa)
Putative flavoprotein n=1 Tax=uncultured archaeon RepID=Q2Y4G2_9ARCH
beta-lactamase domain-containing protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1066_3
unknown

Not on your lists

comp(3464..3607)
DNA (144bp) protein (48aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_1066_4
unknown

Not on your lists

comp(3565..3720)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B9B6_METTP
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1066_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3730..4218)
DNA (489bp) protein (163aa)
Flavodoxin/nitric oxide synthase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MMU4_9EURY
Putative flavoprotein {ECO:0000313|EMBL:KCZ71502.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
flavodoxin/nitric oxide synthase
SR-VP_26_10_2019_2_100cm_scaffold_1066_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4242..5249
DNA (1008bp) protein (336aa)
Cobalt-precorrin-5B C(1)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00787}; EC=2.1.1.195 {ECO:0000256|HAMAP-Rule:MF_00787};; Cobalt-precorrin-6A synthase {ECO:0000256|HAMAP-Rule:MF_00787}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Putative cobalt-precorrin-6A synthase [deacetylating] n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L211_METHD
cobalamin biosynthesis protein CbiD
SR-VP_26_10_2019_2_100cm_scaffold_1066_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5246..5824
DNA (579bp) protein (193aa)
Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit {ECO:0000313|EMBL:KCZ73371.1}; EC=2.1.1.132 {ECO:0000313|EMBL:KCZ73371.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XKR1_METZD
precorrin-6y C5,15-methyltransferase subunit CbiE
SR-VP_26_10_2019_2_100cm_scaffold_1066_8
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5838..6161)
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YHN7_9DELT
Putative uncharacterized protein {ECO:0000313|EMBL:CBX30156.1}; TaxID=201089 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
SR-VP_26_10_2019_2_100cm_scaffold_1066_9
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

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comp(6164..6889)
DNA (726bp) protein (242aa)
Methyltransferase type 11 n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CY69_HALOH
type 11 methyltransferase
Tax=RBG_16_Aminicenantes_63_16_curated
SR-VP_26_10_2019_2_100cm_scaffold_1066_10
unknown

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7115..7333
DNA (219bp) protein (73aa)
UPI0003D1C239 related cluster n=1 Tax=unknown RepID=UPI0003D1C239
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1066_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7330..7809
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MFD5_9EURY
Archaeal flagellin-like protein {ECO:0000313|EMBL:KCZ70975.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1066_12
unknown

Not on your lists

7946..8188
DNA (243bp) protein (81aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_1066_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8425..8673
DNA (249bp) protein (83aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72582.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_1066_14
unknown

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8794..9054
DNA (261bp) protein (87aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_1066_15
unknown

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9256..9558
DNA (303bp) protein (101aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_1066_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9681..10721
DNA (1041bp) protein (347aa)
Methionine synthase II (Cobalamin-independent) {ECO:0000313|EMBL:KCZ72036.1}; EC=2.1.1.14 {ECO:0000313|EMBL:KCZ72036.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12V82_METBU
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
SR-VP_26_10_2019_2_100cm_scaffold_1066_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10747..11856
DNA (1110bp) protein (370aa)
AAA ATPase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12U96_METBU
Putative ATPase (AAA+ superfamily) {ECO:0000313|EMBL:KCZ72035.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
AAA ATPase
SR-VP_26_10_2019_2_100cm_scaffold_1066_18
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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11856..12335
DNA (480bp) protein (160aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JD21_9ARCH
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_1066_19
Galerina marginata, Galerina, Agaricales, Agaricomycetes, Basidiomycota, Eukaryota

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comp(12557..12997)
DNA (441bp) protein (147aa)
Uncharacterized protein {ECO:0000313|EMBL:KDR76656.1}; TaxID=685588 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Strophariaceae; Galerina.;" source="Galerina marginata CBS 339.88.;"
SR-VP_26_10_2019_2_100cm_scaffold_1066_20
Methanosarcina sp. 1.H.A.2.2, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13118..14533)
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TP46_METAC
Uncharacterized protein {ECO:0000313|EMBL:KKH47475.1}; TaxID=1483601 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.A.2.2.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1066_21
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(14877..15314)
DNA (438bp) protein (146aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_1066_22
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(15307..15582)
DNA (276bp) protein (92aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_1066_23
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15655..18585)
DNA (2931bp) protein (977aa)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formylglycinamide ribonucleotide amidotransferase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; Glutamine amidotransferase PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Phosphoribosylformylglycinamidine synthase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LPP3_SYNAS
SR-VP_26_10_2019_2_100cm_scaffold_1066_24
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18758..19894)
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B4E27E
Putative low-complexity protein {ECO:0000313|EMBL:KJE24487.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
pentapeptide repeat-containing protein
SR-VP_26_10_2019_2_100cm_scaffold_1066_25
unknown

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comp(19975..20454)
DNA (480bp) protein (160aa)
Putative uncharacterized protein n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RG33_METVM
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1066_26
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(20578..20931)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFD5_RHOM4
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_1066_27
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20932..21180)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NM97_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KCZ72784.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1066_28
unknown

Not on your lists

21335..22588
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TCA6_9EURY
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1066_29
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

22671..23471
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YZL5_METPS
DNA repair photolyase {ECO:0000313|EMBL:KCZ72504.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1066_30
unknown

Not on your lists

23604..23867
DNA (264bp) protein (88aa)

This feature has no annotations

Displaying items 1-30 of 41 in total

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