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SR-VP_26_10_2019_2_100cm_scaffold_1461

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_1461_1
unknown

Not on your lists

1..189
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I7C5_METCZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1461_2
unknown

Not on your lists

256..1386
DNA (1131bp) protein (377aa)
L-tyrosine decarboxylase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EBV8_METEZ
pyridoxal-dependent decarboxylase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1461_3
unknown

Not on your lists

1435..1809
DNA (375bp) protein (125aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1461_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1859..2872
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I9S0_METCZ
Uncharacterized protein {ECO:0000313|EMBL:KCZ70472.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1461_5
unknown

Not on your lists

comp(2869..3915)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=2 Tax=Methanosarcina mazei RepID=M1QJ28_METMZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1461_6
unknown

Not on your lists

4432..5529
DNA (1098bp) protein (366aa)
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XM82_METZD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1461_7
unknown

Not on your lists

5535..7148
DNA (1614bp) protein (538aa)
O-phosphoserine--tRNA(Cys) ligase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KTS1_METHD
O-phosphoseryl-tRNA(Cys) synthetase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1461_8
unknown

Not on your lists

7145..8008
DNA (864bp) protein (288aa)
Shikimate kinase II (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=AROK_METMA
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1461_9
unknown

Not on your lists

7999..8283
DNA (285bp) protein (95aa)
chorismate mutase (EC:5.4.99.5)
Chorismate mutase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12XK1_METBU
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1461_10
unknown

Not on your lists

8325..9128
DNA (804bp) protein (268aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_1461_trna_1
unknown

Not on your lists

9224..9297
DNA (74bp)
transferRNA Thr
SR-VP_26_10_2019_2_100cm_scaffold_1461_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9350..10513
DNA (1164bp) protein (388aa)
tRNA (guanine(26)-N(2))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00290}; EC=2.1.1.216 {ECO:0000256|HAMAP-Rule:MF_00290};; tRNA 2,2-dimethylguanosine-26 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00290}; tRNA(guanine-26,N(2)-N(2)) methyltransferase {ECO:0000256|HAMAP-Rule:MF_00290}; tRNA(m(2,2)G26)dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00290}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
tRNA (guanine(26)-N(2))-dimethyltransferase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=TRM1_METBF
tRNA N2,N2-dimethyl(Guanine26-N2)-methyltransferase
SR-VP_26_10_2019_2_100cm_scaffold_1461_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10519..13506)
DNA (2988bp) protein (996aa)
Type I restriction enzyme R protein {ECO:0000313|EMBL:KCZ72869.1}; EC=3.1.21.3 {ECO:0000313|EMBL:KCZ72869.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
DEAD/DEAH box helicase n=1 Tax=planctomycete KSU-1 RepID=I3IRI2_9PLAN
type III restriction protein res subunit
SR-VP_26_10_2019_2_100cm_scaffold_1461_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13509..14885)
DNA (1377bp) protein (459aa)
Restriction endonuclease S subunit {ECO:0000313|EMBL:KCZ72870.1}; EC=3.1.21.3 {ECO:0000313|EMBL:KCZ72870.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Type I restriction-modification system specificity determinant n=1 Tax=Desmospora sp. 8437 RepID=F5SEB1_9BACL
restriction modification system DNA specificity domain
SR-VP_26_10_2019_2_100cm_scaffold_1461_14
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14882..15991)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BTE7_METCG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB68152.1}; TaxID=990316 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC; 103675 / OCM 69 / GP-6) (Methanothrix concilii).;"
SR-VP_26_10_2019_2_100cm_scaffold_1461_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16086..17804)
DNA (1719bp) protein (573aa)
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:KCZ72871.1}; EC=2.1.1.72 {ECO:0000313|EMBL:KCZ72871.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
n-6 DNA methylase id=2063439 bin=GWE2_Bacteroidetes_42_42 species=Flavobacteriaceae bacterium S85 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
n-6 DNA methylase
SR-VP_26_10_2019_2_100cm_scaffold_1461_16
unknown

Not on your lists

17930..19645
DNA (1716bp) protein (572aa)
Pyruvate carboxylase subunit B n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MAJ7_9EURY
pyruvate carboxylase subunit B
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1461_17
unknown

Not on your lists

19649..21133
DNA (1485bp) protein (495aa)
acetyl-CoA carboxylase, biotin carboxylase (EC:6.4.1.1)
Acetyl-CoA carboxylase, biotin carboxylase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQF3_METZD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1461_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

21130..22104
DNA (975bp) protein (325aa)
Biotin-(Acetyl-CoA carboxylase) ligase {ECO:0000313|EMBL:KCZ70289.1}; EC=6.3.4.15 {ECO:0000313|EMBL:KCZ70289.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
BirA, biotin-(Acetyl-CoA-carboxylase) ligase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KY84_METHD
birA, biotin-(acetyl-CoA-carboxylase) ligase
SR-VP_26_10_2019_2_100cm_scaffold_1461_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

22109..22531
DNA (423bp) protein (141aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70288.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_1461_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

22534..23163
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EKK2_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:KCZ70287.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_1461_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

23223..23954
DNA (732bp) protein (244aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JC20_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KCZ70384.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1461_22
unknown

Not on your lists

23992..24399
DNA (408bp) protein (136aa)
Ribonuclease HI n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K925_HALHC
ribonuclease HI
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1461_23

Not on your lists

comp(24419..25585)
DNA (1167bp) protein (389aa)
PAS domain S-box n=1 Tax=Beggiatoa alba B18LD RepID=I3CG48_9GAMM
histidine kinase, HAMP protein
Tax=RIFOXYA2_FULL_Elusimicrobia_47_53_curated
SR-VP_26_10_2019_2_100cm_scaffold_1461_24
unknown

Not on your lists

comp(25594..25791)
DNA (198bp) protein (66aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_1461_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(25917..26438)
DNA (522bp) protein (174aa)
CheW protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQ76_METZD
Chemotaxis signal transduction protein {ECO:0000313|EMBL:KCZ71145.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
CheW protein
SR-VP_26_10_2019_2_100cm_scaffold_1461_26
unknown

Not on your lists

comp(26446..27189)
DNA (744bp) protein (248aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MD24_9EURY
methyl-accepting chemotaxis sensory transducer
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 27 items

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