ggKbase home page

SR-VP_26_10_2019_2_100cm_scaffold_1497

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_1497_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

420..1601
DNA (1182bp) protein (394aa)
Bifunctional enzyme Fae/Hps n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=FAEHP_METTP
Bifunctional enzyme Fae/Hps {ECO:0000256|HAMAP-Rule:MF_01268}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase
SR-VP_26_10_2019_2_100cm_scaffold_1497_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1849..2136
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12XB6_METBU
Uncharacterized protein {ECO:0000313|EMBL:KCZ70668.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1497_3
unknown

Not on your lists

2152..2541
DNA (390bp) protein (130aa)
UPF0212 protein Mzhil_0762 n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XKM3_METZD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1497_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2538..3206
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TR10_METAC
Metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein {ECO:0000313|EMBL:KCZ70666.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1497_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3656..4255)
DNA (600bp) protein (200aa)
Conserved protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PVV4_METMA
Uncharacterized protein {ECO:0000313|EMBL:KCZ73284.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1497_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4252..5124)
DNA (873bp) protein (291aa)
Triphosphoribosyl-dephospho-CoA synthetase {ECO:0000313|EMBL:KCZ73283.1}; EC=2.4.2.52 {ECO:0000313|EMBL:KCZ73283.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Putative triphosphoribosyl-dephospho-CoA synthase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46C40_METBF
Triphosphoribosyl-dephospho-CoA synthetase
SR-VP_26_10_2019_2_100cm_scaffold_1497_7
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5165..5641)
DNA (477bp) protein (159aa)
Type I restriction-modification system, specificity subunit S {ECO:0000313|EMBL:AKB32341.1}; EC=3.1.21.3 {ECO:0000313|EMBL:AKB32341.1};; TaxID=1434119 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae HI350.;"
Putative uncharacterized protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HTZ5_9BACT
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1497_8
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5619..7112)
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RHC7_METP4
Uncharacterized protein {ECO:0000313|EMBL:AKB32340.1}; TaxID=1434119 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae HI350.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1497_9
unknown

Not on your lists

comp(7311..8699)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1PBR8_METMZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1497_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8696..9766)
DNA (1071bp) protein (357aa)
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase {ECO:0000256|HAMAP-Rule:MF_01163}; EC=6.3.4.23 {ECO:0000256|HAMAP-Rule:MF_01163};; 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate--formate ligase {ECO:0000256|HAMAP-Rule:MF_01163}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E5Z6_METEZ
IMP biosynthesis enzyme PurP domain-containing protein
SR-VP_26_10_2019_2_100cm_scaffold_1497_11
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(9811..10557)
DNA (747bp) protein (249aa)
Methyltransferase type 12 id=2241978 bin=GWB2_Chloroflexi_49_20 species=Guillardia theta genus=Guillardia taxon_order=Pyrenomonadales taxon_class=Cryptophyta phylum=unknown tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
methyltransferase
Tax=RBG_13_Bathyarchaeota_38_9_curated
SR-VP_26_10_2019_2_100cm_scaffold_1497_12
unknown

Not on your lists

comp(10554..11642)
DNA (1089bp) protein (363aa)
DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46F01_METBF
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1497_13
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11678..12160)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QPN3_PERMH
Uncharacterized protein {ECO:0000313|EMBL:KIH75404.1}; TaxID=1121915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter ferrihydriticus DSM 17813.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1497_14
unknown

Not on your lists

12781..12996
DNA (216bp) protein (72aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_1497_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13138..13428)
DNA (291bp) protein (97aa)
Looped-hinge helix DNA binding domain, AbrB family {ECO:0000313|EMBL:KCZ71334.1}; EC=3.11.1.2 {ECO:0000313|EMBL:KCZ71334.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YZ21_METPS
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1497_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13432..13599)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YZ20_METPS
Uncharacterized protein {ECO:0000313|EMBL:KCZ71335.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1497_17
unknown

Not on your lists

comp(13865..15457)
DNA (1593bp) protein (531aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_1497_18
unknown

Not on your lists

comp(15458..15712)
DNA (255bp) protein (85aa)
Uncharacterized conserved protein UCP006577 n=1 Tax=Methanofollis liminatans DSM 4140 RepID=J1L3Y8_9EURY
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1497_19
unknown

Not on your lists

comp(15709..16161)
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7IA47_METB6
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1497_20
unknown

Not on your lists

comp(16158..17663)
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WQH0_METH6
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1497_21
unknown

Not on your lists

comp(17647..18363)
DNA (717bp) protein (239aa)
RNA methyltransferase TrmH, group 1 n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MA67_9EURY
RNA methyltransferase TrmH, group 1
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1497_22
unknown

Not on your lists

18625..19518
DNA (894bp) protein (298aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_1497_23
unknown

Not on your lists

comp(19706..20062)
DNA (357bp) protein (119aa)
Dihydroneopterin aldolase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MF25_9EURY
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1497_24
unknown

Not on your lists

comp(20049..20732)
DNA (684bp) protein (228aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8)
CDP-diacylglycerol--serine O-phosphatidyltransferase n=2 Tax=Methanosarcina mazei RepID=M1PX51_METMZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1497_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20743..21378)
DNA (636bp) protein (212aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00664}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00664};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KUC8_METHD
phosphatidylserine decarboxylase precursor-related protein
SR-VP_26_10_2019_2_100cm_scaffold_1497_26
unknown

Not on your lists

comp(21368..22195)
DNA (828bp) protein (276aa)
Cytochrome oxidase subunit I-like protein n=2 Tax=Methanosarcina mazei RepID=M1QIN7_METMZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1497_27
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22207..23211)
DNA (1005bp) protein (335aa)
Geranylgeranyl reductase n=1 Tax=Chlorobaculum parvum (strain NCIB 8327) RepID=B3QRE5_CHLP8
Flavin-dependent dehydrogenase {ECO:0000313|EMBL:KCZ73363.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
geranylgeranyl reductase
SR-VP_26_10_2019_2_100cm_scaffold_1497_28
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(23201..23722)
DNA (522bp) protein (174aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ73364.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_1497_29
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

24054..25532
DNA (1479bp) protein (493aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=ARLY_METMA
SR-VP_26_10_2019_2_100cm_scaffold_1497_30
unknown

Not on your lists

25529..26644
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037A868F
putative magnesium transport protein
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying items 1-30 of 54 in total

View Taxonomy