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SR-VP_26_10_2019_2_100cm_scaffold_1677

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_1677_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1..735)
DNA (735bp) protein (245aa)
Geranylgeranyl reductase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8N0_METEZ
Geranylgeranyl reductase family protein {ECO:0000313|EMBL:KCZ70681.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
geranylgeranyl reductase
SR-VP_26_10_2019_2_100cm_scaffold_1677_2
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(738..1382)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46E93_METBF
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_1677_3
unknown

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comp(1379..1489)
DNA (111bp) protein (37aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_1677_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1486..2724)
DNA (1239bp) protein (413aa)
Methanogenesis marker protein 1 n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XP63_METZD
Putative methanogenesis marker protein 1 {ECO:0000313|EMBL:KCZ72239.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1677_5
unknown

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2852..3829
DNA (978bp) protein (326aa)
Cell division protein FtsZ n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0ILB5_NITGG
ftsZ3; cell division protein FtsZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1677_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3832..4794
DNA (963bp) protein (321aa)
Formylmethanofuran dehydrogenase subunit C {ECO:0000313|EMBL:KCZ72240.1}; EC=1.2.99.5 {ECO:0000313|EMBL:KCZ72240.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Formylmethanofuran dehydrogenase subunit C n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L1G1_METHD
formylmethanofuran dehydrogenase subunit C
SR-VP_26_10_2019_2_100cm_scaffold_1677_7
unknown

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4928..5686
DNA (759bp) protein (253aa)
putative phospho-2-dehydro-3-deoxyheptonate aldolase (EC:4.1.2.13)
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EB14_METEZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1677_8
unknown

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5683..6816
DNA (1134bp) protein (378aa)
3-dehydroquinate synthase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KX43_METHD
putative alternative 3-dehydroquinate synthase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1677_9
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

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comp(6940..7446)
DNA (507bp) protein (169aa)
Putative uncharacterized protein n=1 Tax=Shewanella piezotolerans (strain WP3 / JCM 13877) RepID=B8CRR7_SHEPW
hypothetical protein
Tax=RBG_13_Nitrospirae_41_22_curated
SR-VP_26_10_2019_2_100cm_scaffold_1677_10
unknown

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7521..7760
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon E-plasma RepID=T0LS58_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKN09405.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SR-VP_26_10_2019_2_100cm_scaffold_1677_11
unknown

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7739..8137
DNA (399bp) protein (133aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN09406.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1677_12
unknown

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8150..9427
DNA (1278bp) protein (426aa)
Conserved protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PYM5_METMA
Phytoene dehydrogenase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1677_13
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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comp(9411..10556)
DNA (1146bp) protein (382aa)
Amino acid transporter n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I4W1_METCZ
amino acid transporter
Amino acid transporter {ECO:0000313|EMBL:AFD01055.1}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 /; HZ254).;"
SR-VP_26_10_2019_2_100cm_scaffold_1677_trna_2
unknown

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comp(10565..10638)
DNA (74bp)
transferRNA Thr
SR-VP_26_10_2019_2_100cm_scaffold_1677_14
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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10736..11509
DNA (774bp) protein (258aa)
Peptidase A24B, FlaK domain protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XNZ8_METZD
Peptidase A24B, FlaK domain-containing protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_1677_trna_1
unknown

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comp(14823..14895)
DNA (73bp)
transferRNA Ala
SR-VP_26_10_2019_2_100cm_scaffold_1677_16S_1
unknown

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comp(15000..16466)
DNA (1467bp)
16S ribosomal RNA (16S rRNA)
SR-VP_26_10_2019_2_100cm_scaffold_1677_15
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

17148..17684
DNA (537bp) protein (179aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_1677_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17668..18021)
DNA (354bp) protein (118aa)
UPI0003D1A412 related cluster n=1 Tax=unknown RepID=UPI0003D1A412
Nascent polypeptide-associated complex protein {ECO:0000256|HAMAP-Rule:MF_00814}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
alpha-NAC-like protein
SR-VP_26_10_2019_2_100cm_scaffold_1677_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18027..18347)
DNA (321bp) protein (107aa)
Iron-sulfur cluster assembly accessory protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E5V7_METEZ
Iron-sulfur cluster assembly accessory protein {ECO:0000313|EMBL:KCZ70649.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
iron-sulfur cluster assembly accessory protein
SR-VP_26_10_2019_2_100cm_scaffold_1677_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18467..19570
DNA (1104bp) protein (368aa)
Cell division protein FtsZ n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IKP2_NITGG
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ftsZ2; cell division protein FtsZ
SR-VP_26_10_2019_2_100cm_scaffold_1677_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19614..20894)
DNA (1281bp) protein (427aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Phosphomethylpyrimidine synthase n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4C003_METCG
thiC; thiamine biosynthesis protein ThiC
SR-VP_26_10_2019_2_100cm_scaffold_1677_20
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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21047..21928
DNA (882bp) protein (294aa)
PF11185 family protein n=1 Tax=Leptospira wolffii serovar Khorat str. Khorat-H2 RepID=S3UT97_9LEPT
Uncharacterized protein {ECO:0000313|EMBL:AKB64934.1}; TaxID=213585 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei S-6.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1677_21
unknown

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comp(22174..23925)
DNA (1752bp) protein (584aa)
Glycyl-tRNA synthetase (EC:6.1.1.14)
UPI0003D1BF38 related cluster n=1 Tax=unknown RepID=UPI0003D1BF38
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1677_22
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24327..24500)
DNA (174bp) protein (58aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71223.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_1677_23
unknown

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24941..25120
DNA (180bp) protein (60aa)

This feature has no annotations

Displaying 26 items

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