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SR-VP_26_10_2019_2_100cm_scaffold_1758

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_1758_1
unknown

Not on your lists

3..1424
DNA (1422bp) protein (474aa)
Hydrolase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q468R0_METBF
Metallo-beta-lactamase family protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1758_2
unknown

Not on your lists

1503..1994
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos28G7 RepID=Q64AX4_9ARCH
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1758_3
unknown

Not on your lists

2073..2627
DNA (555bp) protein (185aa)
Quinolinate synthase A n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XL77_METZD
quinolinate synthetase complex subunit A
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1758_4
unknown

Not on your lists

2627..3484
DNA (858bp) protein (286aa)
Digeranylgeranylglyceryl phosphate synthase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MN37_9EURY
ubiA; prenyltransferase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1758_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3479..4054)
DNA (576bp) protein (192aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KUM9_METHD
imidazoleglycerol-phosphate dehydratase
SR-VP_26_10_2019_2_100cm_scaffold_1758_6
unknown

Not on your lists

4150..4845
DNA (696bp) protein (232aa)
UPF0278 protein Mzhil_0385 n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XPD3_METZD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1758_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4847..5155
DNA (309bp) protein (103aa)
UPI0003D1B007 related cluster n=1 Tax=unknown RepID=UPI0003D1B007
Uncharacterized protein {ECO:0000313|EMBL:KCZ70794.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1758_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5203..6024
DNA (822bp) protein (274aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UPI0003D1B072 related cluster n=1 Tax=unknown RepID=UPI0003D1B072
hisF; imidazole glycerol phosphate synthase subunit HisF
SR-VP_26_10_2019_2_100cm_scaffold_1758_9
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6027..7019)
DNA (993bp) protein (331aa)
Putative membrane CBS domain-containing protein n=1 Tax=Clostridium intestinale URNW RepID=U2PY15_9CLOT
Putative membrane CBS domain-containing protein {ECO:0000313|EMBL:ERK28684.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1758_10
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7492..7620)
DNA (129bp) protein (43aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_1758_11
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7610..8110)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BYN2_METCG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB67659.1}; TaxID=990316 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC; 103675 / OCM 69 / GP-6) (Methanothrix concilii).;"
SR-VP_26_10_2019_2_100cm_scaffold_1758_12
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8113..8412)
DNA (300bp) protein (100aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JCY7_9ARCH
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_1758_13
Arthrospira sp. PCC 8005, Arthrospira, Oscillatoriales, Cyanobacteria, Bacteria

Not on your lists

8541..9734
DNA (1194bp) protein (398aa)
Putative uncharacterized protein n=1 Tax=Arthrospira sp. PCC 8005 RepID=H1WM66_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:CCE20648.1}; TaxID=376219 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Arthrospira.;" source="Arthrospira sp. PCC 8005.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1758_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(9747..10991)
DNA (1245bp) protein (415aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E742_METMS
SR-VP_26_10_2019_2_100cm_scaffold_1758_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11013..11669
DNA (657bp) protein (219aa)
Peptidase S26B, signal peptidase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MF43_9EURY
Signal peptidase I {ECO:0000313|EMBL:KCZ72551.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
peptidase S26B, signal peptidase
SR-VP_26_10_2019_2_100cm_scaffold_1758_16
unknown

Not on your lists

comp(11658..12899)
DNA (1242bp) protein (414aa)
ORC1-type DNA replication protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MD82_9EURY
cell division control protein 6
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1758_17
unknown

Not on your lists

13781..14191
DNA (411bp) protein (137aa)
Sjogrens syndrome scleroderma autoantigen 1 n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B953_METTP
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1758_18
unknown

Not on your lists

comp(14218..15705)
DNA (1488bp) protein (496aa)
UPI0003D1C530 related cluster n=1 Tax=unknown RepID=UPI0003D1C530
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1758_19
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15748..16623)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090) RepID=A3U4I4_CROAH
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_61_14_curated
SR-VP_26_10_2019_2_100cm_scaffold_1758_20
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(16637..16786)
DNA (150bp) protein (50aa)
Putative uncharacterized protein id=2101302 bin=GWB2_Nitrospirae_rel_47_37 species=uncultured archaeon GZfos33H6 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=GWB2_Nitrospirae_47_37_curated
SR-VP_26_10_2019_2_100cm_scaffold_1758_21

Not on your lists

comp(16783..17001)
DNA (219bp) protein (73aa)
Putative uncharacterized protein id=3240762 bin=GWF2_Nitrospirae_44_13 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
SR-VP_26_10_2019_2_100cm_scaffold_1758_22
Treponema denticola, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(17053..17790)
DNA (738bp) protein (246aa)
Uncharacterized protein n=3 Tax=Treponema denticola RepID=M2BDL7_TREDN
tdeIIIR; type II restriction endonuclease TdeIII
Uncharacterized protein {ECO:0000313|EMBL:EMB33901.1}; TaxID=999430 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema denticola ATCC 35404.;"
SR-VP_26_10_2019_2_100cm_scaffold_1758_23
Ferroplasma sp. Type II, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(17787..19394)
DNA (1608bp) protein (536aa)
Uncharacterized protein n=1 Tax=Ferroplasma sp. Type II RepID=T0M0Q3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB70334.1}; TaxID=261388 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma; environmental samples.;" source="Ferroplasma sp. Type II.;"
DNA methylase N-4/N-6 domain-containing protein
SR-VP_26_10_2019_2_100cm_scaffold_1758_24
unknown

Not on your lists

comp(19414..20088)
DNA (675bp) protein (225aa)
Phosphoglycolate phosphatase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L201_METHD
sucrose-phosphate phosphatase-like hydrolase, Archaeal
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1758_25
unknown

Not on your lists

comp(20106..21083)
DNA (978bp) protein (326aa)
DNA repair and recombination protein RadA n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I6T2_METCZ
radA; DNA repair and recombination protein RadA
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1758_26
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(21264..22388)
DNA (1125bp) protein (375aa)
Single-stranded DNA-binding protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12V72_METBU
Single-stranded DNA-binding protein {ECO:0000313|EMBL:KCZ72148.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
replication factor A
SR-VP_26_10_2019_2_100cm_scaffold_1758_27
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22435..22686)
DNA (252bp) protein (84aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_1758_28
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22676..22843)
DNA (168bp) protein (56aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_1758_29
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22845..24026)
DNA (1182bp) protein (394aa)
UPI0003D1C134 related cluster n=1 Tax=unknown RepID=UPI0003D1C134
Cbb3-type cytochrome oxidase, subunit 1
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_1758_30

Not on your lists

comp(24014..24379)
DNA (366bp) protein (122aa)
Putative uncharacterized protein C4_0035 n=1 Tax=uncultured archaeon RepID=Q2Y4Q3_9ARCH
Putative uncharacterized protein C4_0035 {ECO:0000313|EMBL:CAI64204.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
Nitrous oxidase accessory protein
Displaying 30 items

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