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SR-VP_26_10_2019_2_100cm_scaffold_3213

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_3213_1
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(106..339)
DNA (234bp) protein (78aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_3213_2
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(586..1308)
DNA (723bp) protein (241aa)
UPI0003D1AD12 related cluster n=1 Tax=unknown RepID=UPI0003D1AD12
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_3213_3
unknown

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1421..2167
DNA (747bp) protein (249aa)
30S ribosomal protein S13 n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I732_METCZ
rps13p; 30S ribosomal protein S13
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3213_4
unknown

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2167..2772
DNA (606bp) protein (202aa)
30S ribosomal protein S4 n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8Q6_METEZ
30S ribosomal protein S4
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3213_5
unknown

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2775..3155
DNA (381bp) protein (127aa)
30S ribosomal protein S11 n=2 Tax=Methanosarcina mazei RepID=RS11_METMA
SSU ribosomal protein S14e (S11p)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3213_6
unknown

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3118..3942
DNA (825bp) protein (275aa)
DNA-directed RNA polymerase subunit D (EC:2.7.7.6)
UPI0003D1C798 related cluster n=1 Tax=unknown RepID=UPI0003D1C798
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3213_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4288..9354)
DNA (5067bp) protein (1689aa)
Protein containing N-terminal subtilase family domain + central repeat Fibronectin type III domains + C-terminal repeat PDK domains n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12XJ3_METBU
Putative Ig domain-containing protein {ECO:0000313|EMBL:KCZ72055.1}; Flags: Precursor;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
KP-43 peptidase
SR-VP_26_10_2019_2_100cm_scaffold_3213_8
unknown

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comp(9338..9505)
DNA (168bp) protein (56aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_3213_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(9591..10619)
DNA (1029bp) protein (343aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72054.1}; Flags: Precursor;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_3213_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10635..11087)
DNA (453bp) protein (151aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72053.1}; Flags: Precursor;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_3213_11
Capitella teleta, Capitella, Capitellida, Polychaeta, Annelida, Eukaryota

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comp(11143..11877)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Capitella teleta RepID=R7UCU3_CAPTE
Uncharacterized protein {ECO:0000313|EMBL:ELU01072.1, ECO:0000313|EnsemblMetazoa:CapteP175549}; TaxID=283909 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Polychaeta; Scolecida; Capitellida; Capitellidae; Capitella.;" source="Capitella teleta (Polychaete worm).;"
SR-VP_26_10_2019_2_100cm_scaffold_3213_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11897..12499)
DNA (603bp) protein (201aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72045.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_3213_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12964..13185)
DNA (222bp) protein (74aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71796.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_3213_14
unknown

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comp(13321..13479)
DNA (159bp) protein (53aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3213_15

Not on your lists

comp(13642..15081)
DNA (1440bp) protein (480aa)
Fibrinogen-binding protein-like n=1 Tax=uncultured archaeon GZfos1D1 RepID=Q64C77_9ARCH
Fibrinogen-binding protein-like {ECO:0000313|EMBL:AAU83000.1}; TaxID=286721 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos1D1.;"
Cna B domain protein
SR-VP_26_10_2019_2_100cm_scaffold_3213_16
unknown

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15414..15818
DNA (405bp) protein (135aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_3213_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(15698..17227)
DNA (1530bp) protein (510aa)
Conserved repeat domain protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XK80_METZD
Uncharacterized protein {ECO:0000313|EMBL:KCZ72495.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_3213_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17278..17502)
DNA (225bp) protein (75aa)
Putative uncharacterized protein C5_0052 n=1 Tax=uncultured archaeon RepID=Q2Y4V4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KCZ72746.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
putative transcriptional regulator
SR-VP_26_10_2019_2_100cm_scaffold_3213_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

17846..18046
DNA (201bp) protein (67aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72745.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_3213_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18043..18357)
DNA (315bp) protein (105aa)
Putative uncharacterized protein C5_0052 n=1 Tax=uncultured archaeon RepID=Q2Y4V4_9ARCH
Putative transcriptional regulator {ECO:0000313|EMBL:KCZ72452.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_3213_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

19295..19549
DNA (255bp) protein (85aa)
Putative uncharacterized protein C5_0051 n=1 Tax=uncultured archaeon RepID=Q2Y4V5_9ARCH
Putative transcriptional regulator {ECO:0000313|EMBL:KCZ72452.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_3213_22
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19546..19749)
DNA (204bp) protein (68aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72745.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_3213_23

Not on your lists

19795..20022
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JAJ1_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH39121.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
Displaying 23 items

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