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SR-VP_26_10_2019_2_100cm_scaffold_473

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_473_1
unknown

Not on your lists

1..138
DNA (138bp) protein (46aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_473_2
RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

189..878
DNA (690bp) protein (230aa)
ABC transporter, ATP-binding protein n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O28803_ARCFU
ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_473_3
unknown

Not on your lists

969..1190
DNA (222bp) protein (74aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_473_4
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1171..2205
DNA (1035bp) protein (345aa)
Uncharacterized protein {ECO:0000313|EMBL:AKB84846.1}; TaxID=1434104 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides methylutens MM1.;"
SR-VP_26_10_2019_2_100cm_scaffold_473_5
unknown

Not on your lists

2273..2803
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MEB3_9EURY
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_473_6
unknown

Not on your lists

comp(2809..3384)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI000365C256
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_473_7
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3395..3817)
DNA (423bp) protein (141aa)
Putative nickel-responsive regulator n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=NIKR_UNCMA
nickel responsive regulator
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_473_8
unknown

Not on your lists

comp(3861..4376)
DNA (516bp) protein (172aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_473_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4373..5419)
DNA (1047bp) protein (349aa)
Pyruvate formate-lyase activating enzyme n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PWU9_METMA
Uncharacterized protein {ECO:0000313|EMBL:KCZ72966.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Uncharacterized protein conserved in archaea
SR-VP_26_10_2019_2_100cm_scaffold_473_trna_1
unknown

Not on your lists

5666..5751
DNA (86bp)
transferRNA Ser
SR-VP_26_10_2019_2_100cm_scaffold_473_10
unknown

Not on your lists

comp(5783..6238)
DNA (456bp) protein (152aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_473_11
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6357..10301)
DNA (3945bp) protein (1315aa)
UPI0003D1C669 related cluster n=1 Tax=unknown RepID=UPI0003D1C669
S-layer protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_473_12
unknown

Not on your lists

comp(10457..11098)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7LIU4_METBM
tRNA threonylcarbamoyl adenosine modification protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_473_13
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11221..11457)
DNA (237bp) protein (79aa)
Ferredoxin n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PVY1_METMA
ferredoxin
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_473_14
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11496..12593)
DNA (1098bp) protein (366aa)
Tubulin/FtsZ GTPase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XPD9_METZD
Tubulin/FtsZ GTPase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_473_15
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12601..13743)
DNA (1143bp) protein (381aa)
Cell surface protein n=4 Tax=Bacillus cereus RepID=C2Q9Z4_BACCE
conserved repeat domain protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_473_16
unknown

Not on your lists

comp(13795..15606)
DNA (1812bp) protein (604aa)
Probable potassium transport system protein kup id=2248182 bin=GWB2_Nitrospirae_rel_47_37 species=uncultured Nitrospirae bacterium MY3-5B genus=unknown taxon_order=unknown taxon_class=unknown phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Kup system potassium uptake protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_473_17
unknown

Not on your lists

comp(15720..16856)
DNA (1137bp) protein (379aa)
sulfate adenylyltransferase (EC:2.7.7.4)
Sulfate adenylyltransferase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8V7_METEZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_473_18
unknown

Not on your lists

comp(16889..17608)
DNA (720bp) protein (240aa)
phosphoadenylylsulfate reductase (thioredoxin) (EC:1.8.4.9 1.8.4.8)
Phosphoadenylylsulfate reductase (Thioredoxin) n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAM7_METMS
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_473_19
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17630..18487)
DNA (858bp) protein (286aa)
Sulfite reductase, beta subunit n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TKG8_METAC
sulfite reductase subunit beta
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_473_20
unknown

Not on your lists

18564..19625
DNA (1062bp) protein (354aa)
UPI0003D1A852 related cluster n=1 Tax=unknown RepID=UPI0003D1A852
alanine dehydrogenase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_473_21
RBG_16_Chloroflexi_54_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(19758..20903)
DNA (1146bp) protein (382aa)
saccharopine dehydrogenase-like protein id=24418707 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
Tax=RBG_16_Chloroflexi_54_11_curated
SR-VP_26_10_2019_2_100cm_scaffold_473_22
unknown

Not on your lists

comp(21073..21522)
DNA (450bp) protein (150aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_473_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21602..22345)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8I7_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00159.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SR-VP_26_10_2019_2_100cm_scaffold_473_24
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(22527..23552)
DNA (1026bp) protein (342aa)
Putative uncharacterized protein id=4985962 bin=GWA2_Elusimicrobia_56_46 species=Methanococcoides burtonii genus=Methanococcoides taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
SR-VP_26_10_2019_2_100cm_scaffold_473_25
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(23617..24039)
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JDX3_9ARCH
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_473_26
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24002..24208)
DNA (207bp) protein (69aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_473_27
BJP_IG2102_Methanoregula_52_95, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24366..24605)
DNA (240bp) protein (80aa)
MTH865-like protein n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I7E0_METB6
hypothetical protein
Tax=BJP_IG2102_Methanoregula_52_95
SR-VP_26_10_2019_2_100cm_scaffold_473_28
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24602..24766)
DNA (165bp) protein (55aa)
Putative uncharacterized protein n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z376_9EURY
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_473_29
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

24917..25666
DNA (750bp) protein (250aa)
Transcriptional regulator, ArsR family n=2 Tax=Methanosarcina mazei RepID=M1PCE6_METMZ
Uncharacterized protein {ECO:0000313|EMBL:KCZ70500.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ArsR family transcriptional regulator
Displaying items 1-30 of 59 in total

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