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SR-VP_26_10_2019_2_100cm_scaffold_2020

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_2020_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1..819
DNA (819bp) protein (273aa)
O-phospho-L-seryl-tRNA:Cys-tRNA synthase {ECO:0000256|HAMAP-Rule:MF_01675}; EC=2.5.1.73 {ECO:0000256|HAMAP-Rule:MF_01675};; Sep-tRNA:Cys-tRNA synthase {ECO:0000256|HAMAP-Rule:MF_01675}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Sep-tRNA:Cys-tRNA synthase (EC:2.5.1.-)
O-phospho-L-seryl-tRNA:Cys-tRNA synthase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAM2_METMS
SR-VP_26_10_2019_2_100cm_scaffold_2020_2
unknown

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822..1838
DNA (1017bp) protein (339aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAM1_METMS
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2020_3
unknown

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2196..2360
DNA (165bp) protein (55aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2020_4
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2513..3484
DNA (972bp) protein (324aa)
MoaA/nifB/pqqE family protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TL56_METAC
Mycofactocin radical SAM maturase {ECO:0000313|EMBL:AKB35865.1}; TaxID=1434118 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae C2J.;"
moaA/nifB/pqqE family protein
SR-VP_26_10_2019_2_100cm_scaffold_2020_5
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3432..3737
DNA (306bp) protein (102aa)
MoaA/nifB/pqqE family protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TL56_METAC
Mycofactocin radical SAM maturase {ECO:0000313|EMBL:AKB35865.1}; TaxID=1434118 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae C2J.;"
moaA/nifB/pqqE family protein
SR-VP_26_10_2019_2_100cm_scaffold_2020_6
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3759..4577
DNA (819bp) protein (273aa)
Tax=RBG_16_Deltaproteobacteria_54_18_curated
SR-VP_26_10_2019_2_100cm_scaffold_2020_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4589..5812
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XU46_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP35881.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SR-VP_26_10_2019_2_100cm_scaffold_2020_8
unknown

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5969..6457
DNA (489bp) protein (163aa)
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQE7_METZD
protein CheD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2020_9
unknown

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comp(6464..7339)
DNA (876bp) protein (292aa)
Cation diffusion facilitator family transporter n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G8R0_GEOUR
cation transporter
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2020_10
unknown

Not on your lists

7407..7589
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KSP5_METHD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2020_11
unknown

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comp(7622..8578)
DNA (957bp) protein (319aa)
Cation diffusion facilitator family transporter n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I580_METCZ
cation diffusion facilitator family transporter
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2020_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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8790..9371
DNA (582bp) protein (194aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ73488.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_2020_13
unknown

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9430..9606
DNA (177bp) protein (59aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2020_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9643..9798
DNA (156bp) protein (52aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72716.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_2020_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9921..10736)
DNA (816bp) protein (272aa)
Fe-S oxidoreductase {ECO:0000313|EMBL:KCZ72676.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_2020_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10759..12351)
DNA (1593bp) protein (531aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IJJ0_9PLAN
Fe-S oxidoreductase {ECO:0000313|EMBL:KCZ72676.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2020_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12398..12709
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E7C5_METMS
Uncharacterized protein {ECO:0000313|EMBL:KCZ72675.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2020_18
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(12781..13035)
DNA (255bp) protein (85aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_2020_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13141..14844)
DNA (1704bp) protein (568aa)
Methyl-coenzyme M reductase, alpha subunit {ECO:0000313|EMBL:KCZ72673.1}; EC=2.8.4.1 {ECO:0000313|EMBL:KCZ72673.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
methyl-coenzyme M reductase subunit alpha (EC:2.8.4.1)
Methyl-coenzyme M reductase, alpha subunit n=2 Tax=Methanosalsum zhilinae RepID=F7XL13_METZD
SR-VP_26_10_2019_2_100cm_scaffold_2020_20
unknown

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comp(14856..15605)
DNA (750bp) protein (250aa)
Methyl-coenzyme M reductase, gamma subunit n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PXH7_METMA
methyl-coenzyme M reductase subunit gamma
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2020_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15626..16183)
DNA (558bp) protein (186aa)
Methyl-coenzyme M reductase operon protein D n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=MCRD_METBF
Methyl-coenzyme M reductase operon protein D {ECO:0000313|EMBL:KCZ72671.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Methyl coenzyme M reductase operon protein D
SR-VP_26_10_2019_2_100cm_scaffold_2020_22
unknown

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comp(16194..17498)
DNA (1305bp) protein (435aa)
Methyl-coenzyme M reductase, beta subunit n=2 Tax=Methanosaeta harundinacea RepID=G7WN21_METH6
Methyl-coenzyme M reductase, beta subunit
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2020_23
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17797..18105)
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12ZQ1_METBU
Uncharacterized protein {ECO:0000313|EMBL:KCZ72669.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2020_24
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18214..18597)
DNA (384bp) protein (128aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72667.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_2020_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18605..18979)
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos33H6 RepID=Q64A18_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KCZ72666.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2020_26
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18964..20013)
DNA (1050bp) protein (350aa)
Predicted protease of the collagenase family n=1 Tax=uncultured archaeon GZfos11H11 RepID=Q64EH2_9ARCH
Collagenase-like protease {ECO:0000313|EMBL:KCZ72665.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
peptidase u32
SR-VP_26_10_2019_2_100cm_scaffold_2020_27
unknown

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20150..21385
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YZX5_METPS
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2020_28
unknown

Not on your lists

comp(21382..21837)
DNA (456bp) protein (152aa)
Alkylhydroperoxidase like protein, AhpD family n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XKF0_METZD
alkylhydroperoxidase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2020_29
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(21904..22674)
DNA (771bp) protein (257aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=RLME_METMA
ftsJ; methyltransferase
SR-VP_26_10_2019_2_100cm_scaffold_2020_30
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22700..23650)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TSX2_METAC
Methyltransferase family protein {ECO:0000313|EMBL:KCZ72132.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
Displaying items 1-30 of 37 in total

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