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SR-VP_26_10_2019_2_100cm_scaffold_2461

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_2461_1

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comp(1..168)
DNA (168bp) protein (56aa)
Transposase n=1 Tax=uncultured archaeon GZfos27B6 RepID=Q64BG7_9ARCH
transposase, IS4
Transposase {ECO:0000313|EMBL:AAU83260.1}; TaxID=285385 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos27B6.;"
SR-VP_26_10_2019_2_100cm_scaffold_2461_2
unknown

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comp(225..1565)
DNA (1341bp) protein (447aa)
ATPase-like protein n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7J743_METBM
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2461_3
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1741..2454)
DNA (714bp) protein (238aa)
Glycosyltransferase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TJC0_METAC
glycosyltransferase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_2461_4
unknown

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comp(2560..2718)
DNA (159bp) protein (53aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2461_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2789..3571)
DNA (783bp) protein (261aa)
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TT54_METAC
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase {ECO:0000313|EMBL:KCZ70320.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hpcE; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
SR-VP_26_10_2019_2_100cm_scaffold_2461_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3797..3979
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XNR8_METZD
Uncharacterized protein {ECO:0000313|EMBL:KCZ70319.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2461_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3963..4244
DNA (282bp) protein (94aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70318.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_2461_8
unknown

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4335..4721
DNA (387bp) protein (129aa)
purE; phosphoribosylaminoimidazole carboxylase catalytic subunit PurE (EC:5.4.99.18)
Phosphoribosylaminoimidazole carboxylase, PurE protein n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I597_METCZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2461_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4801..5841
DNA (1041bp) protein (347aa)
Pyrimidine deaminase archaeal predicted (EC:3.5.4.26)
Chlorohydrolase family protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46F74_METBF
Cytosine deaminase-like metal-dependent hydrolase {ECO:0000313|EMBL:KCZ72243.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_2461_10
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5861..6307
DNA (447bp) protein (149aa)
Universal stress protein F-like protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12TM2_METBU
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_2461_11
unknown

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6335..7195
DNA (861bp) protein (287aa)
Uncharacterized protein n=2 Tax=Methanosarcina mazei RepID=M1Q1U5_METMZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2461_12
unknown

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7281..8165
DNA (885bp) protein (295aa)
acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=ARGB_METBU
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2461_13
unknown

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8162..8515
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMT5_METZD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2461_14
unknown

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8570..10297
DNA (1728bp) protein (576aa)
RNase L inhibitor n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TL38_METAC
putative ATPase RIL
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2461_15
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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10294..10989
DNA (696bp) protein (232aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS22260.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
SR-VP_26_10_2019_2_100cm_scaffold_2461_16
unknown

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10970..11245
DNA (276bp) protein (92aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2461_17
RIFCSPLOWO2_01_FULL_OD1_Jorgensenbacteria_45_25b_curated, Jorgensenbacteria, Parcubacteria, Bacteria

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11235..11705
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Thermococcus sp. (strain CGMCC 1.5172 / 4557) RepID=G0HL82_THES4
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Jorgensenbacteria_45_25b_curated
SR-VP_26_10_2019_2_100cm_scaffold_2461_18
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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11727..12899
DNA (1173bp) protein (391aa)
coenzyme F420 hydrogenase subunit beta (EC:1.12.98.1)
Coenzyme F420-dependent oxidoreductase n=2 Tax=Methanosarcina mazei RepID=M1P880_METMZ
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_2461_19
unknown

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13103..13279
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WP54_METH6
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2461_20
unknown

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13336..14211
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CXF2_9CLOT
PAP2 family phosphatase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2461_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(14208..15047)
DNA (840bp) protein (280aa)
Proline dehydrogenase {ECO:0000313|EMBL:KCZ70759.1}; EC=1.5.5.2 {ECO:0000313|EMBL:KCZ70759.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Proline dehydrogenase n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KKF9_9ARCH
proline dehydrogenase
SR-VP_26_10_2019_2_100cm_scaffold_2461_22
unknown

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comp(15168..15464)
DNA (297bp) protein (99aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2461_23
unknown

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comp(15738..16763)
DNA (1026bp) protein (342aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAM1_METMS
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2461_24
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(16833..18020)
DNA (1188bp) protein (396aa)
Sep-tRNA:Cys-tRNA synthase (EC:2.5.1.-)
O-phospho-L-seryl-tRNA:Cys-tRNA synthase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAM2_METMS
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_2461_25
GWF1_WS6_35_23_partial, WS6, Bacteria

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18417..19520
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FIE2_DESAA
Uncharacterized protein {ECO:0000313|EMBL:KKP77135.1}; TaxID=1619097 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_35_23.;"
hypothetical protein
Displaying 25 items

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