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SR-VP_26_10_2019_C_40cm_scaffold_2784

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_C_40cm_scaffold_2784_1
unknown

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comp(330..641)
DNA (312bp) protein (104aa)
Uncharacterized protein id=3819182 bin=GWF2_Bacteroidetes_40_13 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_2784_2
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(853..2250)
DNA (1398bp) protein (466aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_2784_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2247..4154)
DNA (1908bp) protein (636aa)
Subtilisin-like serine protease {ECO:0000313|EMBL:KCZ73596.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Peptidase S8 and S53 subtilisin kexin sedolisin id=2013835 bin=GWB2_Pelobacter_53_15 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
subtilase family serine protease
SR-VP_26_10_2019_C_40cm_scaffold_2784_4
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4159..5580)
DNA (1422bp) protein (474aa)
Cytochrome c, 8 heme-binding sites id=3130449 bin=GWC2_Geobacteraceae_55_20 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
Tax=GWC2_Geobacteraceae_55_20_curated
SR-VP_26_10_2019_C_40cm_scaffold_2784_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5885..7717)
DNA (1833bp) protein (611aa)
IPT/TIG domain-containing protein {ECO:0000313|EMBL:KCZ73597.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Cytochrome c, 8 heme-binding sites id=2013832 bin=GWB2_Pelobacter_53_15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
omcZ; cytochrome c, 8 heme-binding sites
SR-VP_26_10_2019_C_40cm_scaffold_2784_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(7852..9864)
DNA (2013bp) protein (671aa)
Cytochrome c, 8 heme-binding sites n=3 Tax=Bacteria RepID=D7AL56_GEOSK
IPT/TIG domain-containing protein {ECO:0000313|EMBL:KCZ73554.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
omcZ; cytochrome c, 8 heme-binding sites
SR-VP_26_10_2019_C_40cm_scaffold_2784_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10532..10783)
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JHM8_9ARCH
Putative transcriptional regulator {ECO:0000313|EMBL:KCZ72452.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_2784_8
unknown

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10921..11241
DNA (321bp) protein (107aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_2784_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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11279..12154
DNA (876bp) protein (292aa)
ABC-type uncharacterized transport system ATPase component n=1 Tax=uncultured archaeon GZfos27G5 RepID=Q64B40_9ARCH
ABC-type uncharacterized transport system, ATPase component {ECO:0000313|EMBL:KCZ71772.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ABC transporter ATP-binding protein
SR-VP_26_10_2019_C_40cm_scaffold_2784_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12151..13332
DNA (1182bp) protein (394aa)
Putative ATP-dependent Na+ efflux pump n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PY10_METMA
ABC-type Na+ efflux pump, permease component {ECO:0000313|EMBL:KCZ71773.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ATP-dependent Na+ efflux pump
SR-VP_26_10_2019_C_40cm_scaffold_2784_11
unknown

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13438..16041
DNA (2604bp) protein (868aa)
DNA mismatch repair protein MutS n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L0I4_METHD
DNA mismatch repair protein MutS
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_2784_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16178..17233)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MFF7_9EURY
ABC-type Na+ efflux pump, permease component {ECO:0000313|EMBL:KCZ71762.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_2784_13
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(17226..18317)
DNA (1092bp) protein (364aa)
ABC-2 type transporter n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MD59_9EURY
ABC-2 type transporter
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Displaying 13 items

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