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SR-VP_26_10_2019_C_40cm_scaffold_4052

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_C_40cm_scaffold_4052_1

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3..398
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46EI4_METBF
Biotin synthesis protein BioC
Tax=BJP_IG2158_Actinobacteria_57_21
SR-VP_26_10_2019_C_40cm_scaffold_4052_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(454..723)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XPI9_METZD
Uncharacterized protein {ECO:0000313|EMBL:KCZ73584.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_4052_3
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(793..1521)
DNA (729bp) protein (243aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_4052_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1615..2106
DNA (492bp) protein (164aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71222.1}; Flags: Precursor;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_C_40cm_scaffold_4052_5
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2103..2858)
DNA (756bp) protein (252aa)
7-carboxy-7-deazaguanine synthase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YWE8_METPS
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_4052_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2877..3968)
DNA (1092bp) protein (364aa)
Cell division protein FtsZ n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12UQ3_METBU
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
cell division protein FtsZ
SR-VP_26_10_2019_C_40cm_scaffold_4052_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3979..5355)
DNA (1377bp) protein (459aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160314}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160312};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EAD5_METEZ
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_4052_8
unknown

Not on your lists

comp(5390..5653)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KYC0_METHD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_4052_9
unknown

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comp(5673..7886)
DNA (2214bp) protein (738aa)
AAA family ATPase, CDC48 subfamily protein (EC:3.6.4.6)
AAA family ATPase, CDC48 subfamily n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B5A5_METTP
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_4052_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8009..9025)
DNA (1017bp) protein (339aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAM1_METMS
Uncharacterized protein {ECO:0000313|EMBL:KCZ71161.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_4052_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9149..10339)
DNA (1191bp) protein (397aa)
O-phospho-L-seryl-tRNA:Cys-tRNA synthase {ECO:0000256|HAMAP-Rule:MF_01675}; EC=2.5.1.73 {ECO:0000256|HAMAP-Rule:MF_01675};; Sep-tRNA:Cys-tRNA synthase {ECO:0000256|HAMAP-Rule:MF_01675}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Sep-tRNA:Cys-tRNA synthase (EC:2.5.1.-)
O-phospho-L-seryl-tRNA:Cys-tRNA synthase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAM2_METMS
SR-VP_26_10_2019_C_40cm_scaffold_4052_12
unknown

Not on your lists

10424..10591
DNA (168bp) protein (56aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_4052_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10636..10884)
DNA (249bp) protein (83aa)
Glutaredoxin n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EC05_METMS
Alkyl hydroperoxide reductase, large subunit {ECO:0000313|EMBL:KCZ73523.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
glutaredoxin
SR-VP_26_10_2019_C_40cm_scaffold_4052_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11000..11281
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JIW6_9ARCH
Putative transcriptional regulator {ECO:0000313|EMBL:KCZ72452.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_4052_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11278..11493)
DNA (216bp) protein (72aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70475.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_C_40cm_scaffold_4052_16
unknown

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11741..12226
DNA (486bp) protein (162aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_4052_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12358..12804
DNA (447bp) protein (149aa)
Probable deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00635}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00635};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00635};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00635}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Probable deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Methanosarcina mazei RepID=DUT_METMA
SR-VP_26_10_2019_C_40cm_scaffold_4052_18
Marinobacter sp. ES-1, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12814..13059
DNA (246bp) protein (82aa)
ATPase n=3 Tax=Marinobacter RepID=U7G504_9ALTE
ATPase {ECO:0000313|EMBL:ERP93285.1}; TaxID=1396858 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp. ES-1.;"
SR-VP_26_10_2019_C_40cm_scaffold_4052_19
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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13277..13498
DNA (222bp) protein (74aa)
Lrp/AsnC family transcriptional regulator n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12UD4_METBU
AsnC family transcriptional regulator
Lrp/AsnC family transcriptional regulator {ECO:0000313|EMBL:ABE52942.1}; TaxID=259564 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 /; ACE-M).;"
Displaying 19 items

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