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SR-VP_26_10_2019_C_40cm_scaffold_1063

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_C_40cm_scaffold_1063_1
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3..1457)
DNA (1455bp) protein (485aa)
S-layer-related duplication domain protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XNB3_METZD
Uncharacterized protein {ECO:0000313|EMBL:AKB86224.1}; TaxID=1434104 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides methylutens MM1.;"
S-layer protein
SR-VP_26_10_2019_C_40cm_scaffold_1063_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1777..3129)
DNA (1353bp) protein (451aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMA9_METZD
Phosphoglyceromutase {ECO:0000313|EMBL:KCZ72351.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
putative phosphoglycerate mutase
SR-VP_26_10_2019_C_40cm_scaffold_1063_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3141..5036)
DNA (1896bp) protein (632aa)
Glutamyl-tRNA(Gln) amidotransferase subunit E {ECO:0000256|HAMAP-Rule:MF_00588}; Short=Glu-ADT subunit E {ECO:0000256|HAMAP-Rule:MF_00588};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00588};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
glutamyl-tRNA(Gln) amidotransferase subunit E (EC:6.3.5.7)
Glutamyl-tRNA(Gln) amidotransferase subunit E n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12YU2_METBU
SR-VP_26_10_2019_C_40cm_scaffold_1063_4
unknown

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5118..5417
DNA (300bp) protein (100aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_1063_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5455..6717)
DNA (1263bp) protein (421aa)
Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:KCZ70760.1}; EC=3.5.1.18 {ECO:0000313|EMBL:KCZ70760.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase n=1 Tax=uncultured archaeon GZfos10C7 RepID=Q64EN7_9ARCH
peptidase, ArgE/DapE family
SR-VP_26_10_2019_C_40cm_scaffold_1063_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6774..7865
DNA (1092bp) protein (364aa)
Small GTP-binding protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MEH5_9EURY
Small GTP-binding protein domain {ECO:0000313|EMBL:KCZ70761.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
small GTP-binding protein
SR-VP_26_10_2019_C_40cm_scaffold_1063_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7869..8279
DNA (411bp) protein (137aa)
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:KCZ70762.1}; EC=3.6.1.- {ECO:0000313|EMBL:KCZ70762.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ADP-ribose pyrophosphatase (EC:3.6.1.13)
MutT-like protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46E41_METBF
SR-VP_26_10_2019_C_40cm_scaffold_1063_8
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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8263..8565
DNA (303bp) protein (101aa)
DNA-directed RNA polymerase, subunit M (EC:2.7.7.6)
DNA-directed RNA polymerase subunit n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E9S0_METMS
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1063_9
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8562..9488)
DNA (927bp) protein (309aa)
mch; N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase (EC:3.5.4.27)
Methenyltetrahydromethanopterin cyclohydrolase n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=MCH_ARCFU
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_1063_10
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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9709..10395
DNA (687bp) protein (229aa)
thyA; putative thymidylate synthase (EC:2.1.1.45)
Putative thymidylate synthase n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W8I4_UNCMA
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1063_11
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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10409..11092
DNA (684bp) protein (228aa)
deoxyribonuclease V (EC:3.1.21.7)
Endonuclease V n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EB43_METEZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1063_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11084..11641)
DNA (558bp) protein (186aa)
UPI0003D1AF49 related cluster n=1 Tax=unknown RepID=UPI0003D1AF49
Nitroreductase {ECO:0000313|EMBL:KCZ72840.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
nitroreductase
SR-VP_26_10_2019_C_40cm_scaffold_1063_13
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11675..12436)
DNA (762bp) protein (254aa)
Hydrogenase accessory protein HypB n=1 Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P8C1_METFA
hydrogenase accessory protein HypB
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_1063_14
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(12387..13280)
DNA (894bp) protein (298aa)
formylmethanofuran/tetrahydromethanopterin N-formyltransferase (EC:2.3.1.101)
Formylmethanofuran--tetrahydromethanopterin formyltransferase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XL43_METZD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1063_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13420..13773)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E5U3_METEZ
Putative metal-binding protein {ECO:0000313|EMBL:KCZ73567.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_1063_16
unknown

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14217..14465
DNA (249bp) protein (83aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_1063_17
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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14475..15701
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4YKZ4_9ARCH
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1063_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15703..16185
DNA (483bp) protein (161aa)
Putative flavin-nucleotide-binding protein {ECO:0000313|EMBL:KCZ73564.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_1063_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16218..16820
DNA (603bp) protein (201aa)
Methyltransferase type 11 n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TAU7_METSL
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:KCZ73563.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
type 11 methyltransferase
SR-VP_26_10_2019_C_40cm_scaffold_1063_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16817..17479)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI00035C80BE
Glutaredoxin-like domain protein {ECO:0000313|EMBL:KCZ73562.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_1063_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17485..17664)
DNA (180bp) protein (60aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ73561.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_C_40cm_scaffold_1063_22
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(17675..17962)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HKW7_PYRSN
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1063_23
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18048..18902)
DNA (855bp) protein (285aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ73559.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Hypothetical conserved protein id=2164666 bin=GWB2_Chloroflexi_54_36 species=Candidatus Caldiarchaeum subterraneum genus=Candidatus Caldiarchaeum taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_1063_24
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


19061..20293
DNA (1233bp) protein (411aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E742_METMS
SR-VP_26_10_2019_C_40cm_scaffold_1063_25
unknown

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comp(20286..20402)
DNA (117bp) protein (39aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_1063_26
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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20465..20707
DNA (243bp) protein (81aa)
Hypothetical transcriptional regulator n=1 Tax=Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) RepID=Q6L2A8_PICTO
transcriptional regulator
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_1063_27
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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20740..21105
DNA (366bp) protein (122aa)
PilT protein-like protein n=1 Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FSM9_METHJ
twitching motility protein PilT
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_1063_28
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(21115..21936)
DNA (822bp) protein (274aa)
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=HIS6_METAC
hisF; imidazole glycerol phosphate synthase subunit HisF
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1063_29
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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22130..23122
DNA (993bp) protein (331aa)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KZZ5_METHD
phosphoribosylaminoimidazole synthetase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1063_30
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(23183..23494)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HEZ9_METFS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB01654.1}; Flags: Precursor;; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
Displaying items 1-30 of 49 in total

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