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SR-VP_26_10_2019_C_40cm_scaffold_1096

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_C_40cm_scaffold_1096_1
Methanosarcina sp. 2.H.T.1A.6, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1..1005
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q465V8_METBF
Uncharacterized protein {ECO:0000313|EMBL:KKG19653.1}; TaxID=1483599 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.6.;"
cell surface protein
SR-VP_26_10_2019_C_40cm_scaffold_1096_2

Not on your lists

1148..2518
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1QF91_METMZ
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
SR-VP_26_10_2019_C_40cm_scaffold_1096_3
unknown

Not on your lists

2571..2729
DNA (159bp) protein (53aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_1096_4
unknown

Not on your lists

2880..3389
DNA (510bp) protein (170aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_1096_5
unknown

Not on your lists

3401..4261
DNA (861bp) protein (287aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_1096_6
unknown

Not on your lists

4258..4704
DNA (447bp) protein (149aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_1096_7
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5060..5641)
DNA (582bp) protein (194aa)
glutamine amidotransferase n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI000363AD7F
PfpI family intracellular peptidase
Tax=RBG_16_Deltaproteobacteria_49_23_curated
SR-VP_26_10_2019_C_40cm_scaffold_1096_8
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6301..6948)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46E93_METBF
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_1096_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6945..8183)
DNA (1239bp) protein (413aa)
Methanogenesis marker protein 1 n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XP63_METZD
Putative methanogenesis marker protein 1 {ECO:0000313|EMBL:KCZ72239.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
methanogenesis marker protein 1
SR-VP_26_10_2019_C_40cm_scaffold_1096_10
unknown

Not on your lists

8288..9265
DNA (978bp) protein (326aa)
Cell division protein FtsZ n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0ILB5_NITGG
ftsZ3; cell division protein FtsZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1096_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9498..10466
DNA (969bp) protein (323aa)
Formylmethanofuran dehydrogenase subunit C {ECO:0000313|EMBL:KCZ72240.1}; EC=1.2.99.5 {ECO:0000313|EMBL:KCZ72240.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UPI0003D1B1A0 related cluster n=1 Tax=unknown RepID=UPI0003D1B1A0
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_1096_12
unknown

Not on your lists

10530..10946
DNA (417bp) protein (139aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_1096_13
GWA2_OP11_42_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

11025..11516
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) RepID=F9VPI1_SULTO
Nucleotidyltransferase/HEPN domain protein {ECO:0000313|EMBL:KKS69004.1}; Flags: Fragment;; TaxID=1618425 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_42_7.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_1096_14
unknown

Not on your lists

11513..11920
DNA (408bp) protein (136aa)
Nucleotidyltransferase/HEPN domain protein n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3ABE8_CARHZ
Marine sediment metagenome DNA, contig: S03H2_S09338 {ECO:0000313|EMBL:GAH70361.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
nucleotidyltransferase/HEPN domain-containing protein
SR-VP_26_10_2019_C_40cm_scaffold_1096_15
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11921..12406
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GCL5_9FIRM
hexapeptide repeat-containing transferase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_1096_16
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12403..13002
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z097_METPS
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_1096_17
unknown

Not on your lists

13028..13363
DNA (336bp) protein (112aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1096_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13356..13781
DNA (426bp) protein (142aa)
Nitroreductase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQ32_METZD
Nitroreductase {ECO:0000313|EMBL:KCZ70437.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
nitroreductase
SR-VP_26_10_2019_C_40cm_scaffold_1096_19
unknown

Not on your lists

14247..14384
DNA (138bp) protein (46aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1096_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14444..14917
DNA (474bp) protein (158aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70442.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein id=1870556 bin=GWB2_Proteobacteria_55_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
SR-VP_26_10_2019_C_40cm_scaffold_1096_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15125..16741
DNA (1617bp) protein (539aa)
Thermosome, alpha subunit n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PXX0_METMA
Thermosome subunit {ECO:0000313|EMBL:KCZ71569.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Heat shock protein 60 family chaperone GroEL
SR-VP_26_10_2019_C_40cm_scaffold_1096_22
unknown

Not on your lists

comp(16768..17310)
DNA (543bp) protein (181aa)
2'-5' RNA ligase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EBG0_METEZ
2'-5' RNA ligase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1096_23
unknown

Not on your lists

17579..18577
DNA (999bp) protein (333aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_1096_24
RBG_16_OP11_Levybacteria_35_11_curated, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(18676..18843)
DNA (168bp) protein (56aa)
Tax=RBG_16_OP11_Levybacteria_35_11_curated
SR-VP_26_10_2019_C_40cm_scaffold_1096_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

19691..22351
DNA (2661bp) protein (887aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9W9Q7_9CYAN
PAS domain S-box {ECO:0000313|EMBL:KCZ71993.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_C_40cm_scaffold_1096_26
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

22374..22766
DNA (393bp) protein (131aa)
PhoP response regulator receiver n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12Y16_METBU
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:KCZ72124.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
response regulator receiver
SR-VP_26_10_2019_C_40cm_scaffold_1096_27
unknown

Not on your lists

22990..23364
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UYH3_ROSS1
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1096_28
unknown

Not on your lists

comp(23361..24167)
DNA (807bp) protein (269aa)
Rhomboid family protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMA2_METZD
rhomboid family protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1096_29
unknown

Not on your lists

comp(24194..24904)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MEE3_9EURY
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1096_30
unknown

Not on your lists

24946..25155
DNA (210bp) protein (70aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying items 1-30 of 45 in total

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