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SR-VP_0-2_scaffold_141_2187755

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_0-2_scaffold_141_2187755_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(145..1302)
DNA (1158bp) protein (386aa)
LL-diaminopimelate aminotransferase apoenzyme {ECO:0000313|EMBL:KCZ72979.1}; EC=2.6.1.83 {ECO:0000313|EMBL:KCZ72979.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LL-diaminopimelate aminotransferase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XM81_METZD
LL-diaminopimelate aminotransferase
SR-VP_0-2_scaffold_141_2187755_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(1399..1761)
DNA (363bp) protein (121aa)
Conserved protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PVB8_METMA
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_2187755_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1816..2559
DNA (744bp) protein (248aa)
tRNA(1-methyladenosine) methyltransferase-like methyltransferase {ECO:0000313|EMBL:KCZ73511.1}; EC=2.1.1.219 {ECO:0000313|EMBL:KCZ73511.1};; EC=2.1.1.220 {ECO:0000313|EMBL:KCZ73511.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Putative methyltransferase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MRF9_9EURY
putative methyltransferase
SR-VP_0-2_scaffold_141_2187755_4
Methanoculleus marisnigri, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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3100..5895
DNA (2796bp) protein (932aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036B7E9B
hypothetical protein
Ig domain protein, group 2 domain protein {ECO:0000313|EMBL:ABN57143.1}; Flags: Precursor;; TaxID=368407 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1).;"
SR-VP_0-2_scaffold_141_2187755_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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6200..6850
DNA (651bp) protein (217aa)
Hypothetical conserved protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5STX3_9BACT id=5224244 bin=16ft_combo_ws3_JS1 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
NapC/NirT family cyctochrome c
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_2187755_6
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(7227..7787)
DNA (561bp) protein (187aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_0-2_scaffold_141_2187755_7
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(7875..8495)
DNA (621bp) protein (207aa)
Probable RNA 2'-phosphotransferase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12V71_METBU
RNA 2'-phosphotransferase-like protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_2187755_8
unknown

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comp(8545..8754)
DNA (210bp) protein (70aa)

This feature has no annotations

SR-VP_0-2_scaffold_141_2187755_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(8786..9235)
DNA (450bp) protein (150aa)
UPF0179 protein Mthe_0220 n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=Y220_METTP
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_2187755_10
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(9269..10330)
DNA (1062bp) protein (354aa)
egsA; NAD(P)-dependent glycerol-1-phosphate dehydrogenase (EC:1.1.1.261)
Glycerol-1-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=G1PDH_METAC
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_2187755_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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10342..11202
DNA (861bp) protein (287aa)
Conserved membrane protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FR8_METBF
Putative membrane protein {ECO:0000313|EMBL:KCZ73609.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_0-2_scaffold_141_2187755_12
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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11204..11788
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8D3_METEZ
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_0-2_scaffold_141_2187755_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11739..13694)
DNA (1956bp) protein (652aa)
PAPS reductase/FAD synthetase family protein {ECO:0000313|EMBL:KCZ71018.1}; EC=1.8.4.8 {ECO:0000313|EMBL:KCZ71018.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Phosphoadenosine phosphosulfate reductase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E975_METEZ
phosphoadenosine phosphosulfate reductase
SR-VP_0-2_scaffold_141_2187755_14
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(13700..14497)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PVP8_METMA
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_2187755_15
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(14500..15519)
DNA (1020bp) protein (340aa)
RPA associated protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T3V7_9EURY
Glycerol dehydrogenase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_0-2_scaffold_141_2187755_16
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(15521..16786)
DNA (1266bp) protein (422aa)
Nucleic acid binding OB-fold tRNA/helicase-type n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EAB6_METEZ
nucleic acid-binding OB-fold tRNA/helicase-type protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_2187755_17
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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16978..17517
DNA (540bp) protein (180aa)
id=5046915 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_2187755_18
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17771..18544)
DNA (774bp) protein (258aa)
MarR family transcriptional regulator n=2 Tax=Methanosarcina mazei RepID=M1PU87_METMZ
transcriptional regulator
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_0-2_scaffold_141_2187755_19
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(18590..19081)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KX99_METHD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 19 items

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