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SR-VP_0-2_scaffold_141_2345835

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_0-2_scaffold_141_2345835_1
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(3..980)
DNA (978bp) protein (326aa)
tRNA pseudouridine synthase Pus10 n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XN18_METZD
THUMP domain-containing protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_2345835_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1004..1588)
DNA (585bp) protein (195aa)
tRNA (pseudouridine(54)-N(1))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00587}; EC=2.1.1.257 {ECO:0000256|HAMAP-Rule:MF_00587};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
tRNA (pseudouridine(54)-N(1))-methyltransferase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XN19_METZD
hypothetical protein
SR-VP_0-2_scaffold_141_2345835_3
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1855..2433)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0GRK2_9EURY
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_0-2_scaffold_141_2345835_4
Archaeoglobus sulfaticallidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(2532..3032)
DNA (501bp) protein (167aa)
Putative nucleic acid-binding protein, contains PIN domain n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BIT4_9EURY
putative nucleic acid-binding protein, contains PIN domain
Putative nucleic acid-binding protein, contains PIN domain {ECO:0000313|EMBL:AGK62247.1}; TaxID=387631 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus sulfaticallidus PM70-1.;"
SR-VP_0-2_scaffold_141_2345835_5
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(3016..3324)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RX62_FERPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADC65075.1}; TaxID=589924 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ferroglobus.;" source="Ferroglobus placidus (strain DSM 10642 / AEDII12DO).;"
SR-VP_0-2_scaffold_141_2345835_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3623..4918
DNA (1296bp) protein (432aa)
Putative DNA repair exonuclease n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I9S3_METCZ
DNA repair exonuclease {ECO:0000313|EMBL:KCZ71925.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
DNA repair exonuclease
SR-VP_0-2_scaffold_141_2345835_7
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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4919..7228
DNA (2310bp) protein (770aa)
Putative DNA double-strand break repair Rad50 ATPase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YYH2_METPS
putative DNA double-strand break repair Rad50 ATPase
Putative DNA double-strand break repair Rad50 ATPase {ECO:0000313|EMBL:BAI61494.1}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
SR-VP_0-2_scaffold_141_2345835_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7225..8373
DNA (1149bp) protein (383aa)
NurA domain protein n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I9S5_METCZ
NurA domain-containing protein {ECO:0000313|EMBL:KCZ71923.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
NurA domain-containing protein
SR-VP_0-2_scaffold_141_2345835_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8378..8893
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YYG8_METPS
Uncharacterized protein {ECO:0000313|EMBL:KCZ71922.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_0-2_scaffold_141_2345835_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8890..10458
DNA (1569bp) protein (523aa)
Putative ATPase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I9S7_METCZ
Putative ATPase {ECO:0000313|EMBL:KCZ71921.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ATPase
SR-VP_0-2_scaffold_141_2345835_11
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(10510..11502)
DNA (993bp) protein (331aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4)
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1YZN3_9EURY
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_2345835_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11499..12083)
DNA (585bp) protein (195aa)
Holliday junction DNA helicase subunit RuvA {ECO:0000313|EMBL:KCZ73525.1}; EC=3.6.4.12 {ECO:0000313|EMBL:KCZ73525.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Holliday junction DNA helicase RuvA n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7LKI0_METBM
ruvA; holliday junction DNA helicase RuvA
Displaying 12 items

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