ggKbase home page

SR-VP_0-2_scaffold_141_3769678

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_0-2_scaffold_141_3769678_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2..1426
DNA (1425bp) protein (475aa)
Methyl-coenzyme M reductase, alpha subunit {ECO:0000313|EMBL:KCZ72673.1}; EC=2.8.4.1 {ECO:0000313|EMBL:KCZ72673.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
methyl-coenzyme M reductase subunit alpha (EC:2.8.4.1)
Methyl-coenzyme M reductase, alpha subunit n=2 Tax=Methanosalsum zhilinae RepID=F7XL13_METZD
SR-VP_0-2_scaffold_141_3769678_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1535..1783
DNA (249bp) protein (83aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72674.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_0-2_scaffold_141_3769678_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1853..2158)
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E7C5_METMS
Uncharacterized protein {ECO:0000313|EMBL:KCZ72675.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_0-2_scaffold_141_3769678_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2299..2466)
DNA (168bp) protein (56aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72717.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_0-2_scaffold_141_3769678_5
unknown

Not on your lists

2594..3547
DNA (954bp) protein (318aa)
Cation diffusion facilitator family transporter n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I580_METCZ
cation diffusion facilitator family transporter
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_3769678_6
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

3592..4227
DNA (636bp) protein (212aa)
MgtC/SapB transporter id=2047577 bin=GWD2_Clostridiales_32_59 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Clostridiales_32_59 organism_group=Firmicute organism_desc=a65
putative Mg transporter
Tax=RBG_16_Pacearchaeota_35_8_curated
SR-VP_0-2_scaffold_141_3769678_7
unknown

Not on your lists

comp(4263..4550)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E5Z9_METEZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_3769678_8
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4612..5487
DNA (876bp) protein (292aa)
Cation efflux family protein id=4329427 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
cation diffusion facilitator family transporter
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_0-2_scaffold_141_3769678_9
unknown

Not on your lists

comp(5494..5994)
DNA (501bp) protein (167aa)
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQE7_METZD
protein CheD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_3769678_10
unknown

Not on your lists

comp(6072..6689)
DNA (618bp) protein (206aa)
CheC, inhibitor of MCP methylation n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQE6_METZD
MCP methylation inhibitor CheC
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_3769678_11
unknown

Not on your lists

comp(6692..7534)
DNA (843bp) protein (281aa)
MCP methyltransferase (EC:2.1.1.80)
MCP methyltransferase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MFG7_9EURY
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_3769678_12
unknown

Not on your lists

comp(7531..9483)
DNA (1953bp) protein (651aa)
Signal transduction histidine kinase CheA n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MSU3_9EURY
signal transduction histidine kinase CheA
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_3769678_13
unknown

Not on your lists

comp(9495..10640)
DNA (1146bp) protein (382aa)
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KW03_METHD
chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_3769678_14
unknown

Not on your lists

comp(10650..11009)
DNA (360bp) protein (120aa)
Response regulator receiver protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQ77_METZD
response regulator receiver protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_3769678_15
unknown

Not on your lists

comp(11139..12794)
DNA (1656bp) protein (552aa)
Type II secretion system protein F domain n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12VP6_METBU
flagellar assembly protein J
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_3769678_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12797..14344)
DNA (1548bp) protein (516aa)
ATPase, type IV secretory pathway VirB11 component like protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXM4_METHD
ATPase, type IV secretory pathway VirB11 component like protein {ECO:0000313|EMBL:KCZ71132.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ATPase, type IV secretory pathway VirB11 component like protein
SR-VP_0-2_scaffold_141_3769678_17
unknown

Not on your lists

comp(14443..15135)
DNA (693bp) protein (231aa)
KaiC or RadA ATPase domain protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12VP8_METBU
ATPase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_3769678_18
unknown

Not on your lists

comp(15141..15587)
DNA (447bp) protein (149aa)
Putative archaeal flagellar protein G n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KTI0_METHD
putative archaeal flagellar protein G
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_3769678_19
unknown

Not on your lists

comp(15597..15986)
DNA (390bp) protein (130aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_3769678_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16001..16618)
DNA (618bp) protein (206aa)
Flagellin n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MK68_9EURY
Archaeal flagellin {ECO:0000313|EMBL:KCZ71136.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
flagellin
SR-VP_0-2_scaffold_141_3769678_21
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16663..17265)
DNA (603bp) protein (201aa)
Flagellin n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MK68_9EURY
flagellin
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_0-2_scaffold_141_3769678_22
unknown

Not on your lists

comp(17417..18049)
DNA (633bp) protein (211aa)
HoxA-like transcriptional regulator n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1PGZ5_9EURY
putative response regulator
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 22 items

View Taxonomy