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Mp_Bioreactor_2_59586

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Displaying items 1-30 of 95 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Mp_Bioreactor_2_59586_1
unknown

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comp(2..379)
DNA (378bp) protein (126aa)

This feature has no annotations

Mp_Bioreactor_2_59586_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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957..2102
DNA (1146bp) protein (382aa)
peptidase M24
Peptidase M24 n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EAD2_METEZ
Tax=RBG_16_Euryarchaeota_41_19_curated
Mp_Bioreactor_2_59586_3
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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2102..2977
DNA (876bp) protein (292aa)
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMV1_METZD
Tax=RBG_16_Euryarchaeota_41_19_curated
Mp_Bioreactor_2_59586_4
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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2974..3792
DNA (819bp) protein (273aa)
hypothetical protein
UPI0003D1B00E related cluster n=1 Tax=unknown RepID=UPI0003D1B00E
Tax=RBG_16_Euryarchaeota_41_19_curated
Mp_Bioreactor_2_59586_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(3828..5621)
DNA (1794bp) protein (598aa)
signal transduction histidine kinase
Predicted signal transduction histidine kinase n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W8Y7_UNCMA
Tax=RBG_16_Euryarchaeota_41_19_curated
Mp_Bioreactor_2_59586_6
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(5752..6153)
DNA (402bp) protein (134aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YUR5_METPS
Tax=RBG_16_Euryarchaeota_41_19_curated
Mp_Bioreactor_2_59586_7
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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6314..7072
DNA (759bp) protein (253aa)
succinate dehydrogenase and fumarate reductase iron-sulfur protein (EC:1.3.99.1)
Succinate dehydrogenase and fumarate reductase iron-sulfur protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XLX9_METZD
Tax=RBG_16_Euryarchaeota_41_19_curated
Mp_Bioreactor_2_59586_8
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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7075..7413
DNA (339bp) protein (113aa)
succinate dehydrogenase, cytochrome b556 subunit
Succinate dehydrogenase, cytochrome b556 subunit n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CMY0_DESK7
Tax=RBG_16_Euryarchaeota_41_19_curated
Mp_Bioreactor_2_59586_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(7429..8835)
DNA (1407bp) protein (469aa)
dihydrolipoamide dehydrogenase
Dihydrolipoyl dehydrogenase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SUR8_9BACT
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Mp_Bioreactor_2_59586_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8836..10074)
DNA (1239bp) protein (413aa)
pyruvate dehydrogenase E2 component dihydrolipoamide acetyltransferase (EC:2.3.1.12)
Pyruvate dehydrogenase E2 component (Dihydrolipoamide acetyltransferase) n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5S9Z8_9BACT
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component {ECO:0000313|EMBL:KCZ70908.1}; EC=2.3.1.12 {ECO:0000313|EMBL:KCZ70908.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Mp_Bioreactor_2_59586_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(10084..11061)
DNA (978bp) protein (326aa)
transketolase, central region
Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5S918_9BACT
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit {ECO:0000313|EMBL:KCZ70909.1}; EC=1.2.4.1 {ECO:0000313|EMBL:KCZ70909.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Mp_Bioreactor_2_59586_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(11058..12113)
DNA (1056bp) protein (352aa)
pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.4 1.2.4.1)
Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5ST06_9BACT
Pyruvate dehydrogenase E1 component, alpha subunit {ECO:0000313|EMBL:KCZ70910.1}; EC=1.2.4.1 {ECO:0000313|EMBL:KCZ70910.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Mp_Bioreactor_2_59586_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(12208..12954)
DNA (747bp) protein (249aa)
putative biotin/lipoate A/B protein ligase
Lipoate-protein ligase A, C-terminal id=5799643 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Lipoate-protein ligase A {ECO:0000313|EMBL:KCZ72719.1}; EC=2.7.7.63 {ECO:0000313|EMBL:KCZ72719.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Mp_Bioreactor_2_59586_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(13125..13262)
DNA (138bp) protein (46aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72716.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Mp_Bioreactor_2_59586_15
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(13541..14392)
DNA (852bp) protein (284aa)
hypothetical protein
Putative membrane protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KVC5_METHD
Putative membrane protein {ECO:0000313|EMBL:AGB49091.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
Mp_Bioreactor_2_59586_16
BJP_IG2102_Methanoregula_52_95, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(14577..15080)
DNA (504bp) protein (168aa)
protein of unknown function (DUF350)
Uncharacterized protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HJN1_METFS
Tax=BJP_IG2102_Methanoregula_52_95
Mp_Bioreactor_2_59586_17
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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15420..15791
DNA (372bp) protein (124aa)
transcriptional regulator TrmB
Transcriptional regulator n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12UA5_METBU
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Mp_Bioreactor_2_59586_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(15813..16838)
DNA (1026bp) protein (342aa)
Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase
UPF0284 protein Mzhil_0791 n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XKP4_METZD
UPF0284 protein ANME2D_00526 {ECO:0000256|HAMAP-Rule:MF_01086}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Mp_Bioreactor_2_59586_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(16846..18225)
DNA (1380bp) protein (460aa)
TOPRIM domain-containing protein
DNA primase DnaG n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMI4_METZD
DNA primase DnaG {ECO:0000256|HAMAP-Rule:MF_00007, ECO:0000256|SAAS:SAAS00020821}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00007, ECO:0000256|SAAS:SAAS00020820};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Mp_Bioreactor_2_59586_20
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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18806..19261
DNA (456bp) protein (152aa)
hypothetical protein
Putative integron gene cassette protein n=1 Tax=uncultured bacterium RepID=B0BGI3_9BACT
Tax=RBG_13_Deltaproteobacteria_43_22_curated
Mp_Bioreactor_2_59586_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(19288..20091)
DNA (804bp) protein (268aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PXF6_METMA
Uncharacterized protein {ECO:0000313|EMBL:KCZ73087.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Mp_Bioreactor_2_59586_22

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comp(20104..20982)
DNA (879bp) protein (293aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W925_UNCMA
Uncharacterized protein {ECO:0000313|EMBL:KKN03681.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Mp_Bioreactor_2_59586_23

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comp(21002..23407)
DNA (2406bp) protein (802aa)
DNA/RNA helicase (EC:3.6.-.-)
Putative DNA/RNA helicase (SNF2 family) n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W926_UNCMA
Uncharacterized protein {ECO:0000313|EMBL:KKN03680.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Mp_Bioreactor_2_59586_24
unknown

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23671..24120
DNA (450bp) protein (150aa)

This feature has no annotations

Mp_Bioreactor_2_59586_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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24248..25336
DNA (1089bp) protein (363aa)
NADH:flavin oxidoreductase
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8VXV3_DESAS
NADH:flavin oxidoreductase {ECO:0000313|EMBL:KCZ72491.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Mp_Bioreactor_2_59586_26
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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25296..26594
DNA (1299bp) protein (433aa)
PAS domain S-box
PAS domain S-box n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KZG6_METHD
PAS domain S-box {ECO:0000313|EMBL:KCZ72090.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Mp_Bioreactor_2_59586_trna_2
unknown

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comp(26643..26753)
DNA (111bp)
transferRNA Met
Mp_Bioreactor_2_59586_27
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(26825..28102)
DNA (1278bp) protein (426aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
Probable 3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAA3_METMS
Tax=RBG_16_Euryarchaeota_41_19_curated
Mp_Bioreactor_2_59586_28
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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28204..28491
DNA (288bp) protein (96aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
Mp_Bioreactor_2_59586_29
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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28588..30474
DNA (1887bp) protein (629aa)
arginine decarboxylase (EC:4.1.1.19)
Arginine decarboxylase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJD0_CHLTF
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying items 1-30 of 95 in total

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