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N2_064_000G1_scaffold_257

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Displaying items 1-30 of 56 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
N2_064_000G1_scaffold_257_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(448..945)
DNA (498bp) protein (166aa)
Phosphatidylethanolamine-binding family protein Tax=Clostridium difficile RepID=C9XR85_CLODC
phosphatidylethanolamine-binding regulatory protein
Phosphatidylethanolamine-binding family protein {ECO:0000313|EMBL:EQI76431.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
N2_064_000G1_scaffold_257_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1051..1413)
DNA (363bp) protein (121aa)
HxlR-like helix-turn-helix family protein Tax=Clostridium difficile RepID=T3G4A2_CLODC
HxlR family transcriptional regulator
Transcriptional regulator, hxlR family {ECO:0000313|EMBL:CAJ70062.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
N2_064_000G1_scaffold_257_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1431..2045)
DNA (615bp) protein (205aa)
Uncharacterized protein Tax=Clostridium difficile RepID=T3G6N0_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL31437.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
N2_064_000G1_scaffold_257_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2638..4773
DNA (2136bp) protein (712aa)
rnr; ribonuclease R (EC:3.1.-.-)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Ribonuclease R Tax=Clostridium difficile RepID=T3G1R2_CLODC
N2_064_000G1_scaffold_257_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5523..6014
DNA (492bp) protein (164aa)
Uncharacterized protein Tax=Clostridium difficile RepID=T3G414_CLODC
conserved hypothetical protein
Domain of uncharacterised function (DUF1877) {ECO:0000313|EMBL:CKG81879.1}; Uncharacterized protein {ECO:0000313|EMBL:CEJ99812.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
N2_064_000G1_scaffold_257_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6544..7416
DNA (873bp) protein (291aa)
ABC-type transport system, multidrug-familyATP-binding protein (EC:3.6.3.-)
ABC transporter family protein Tax=Clostridium difficile RepID=T3G842_CLODC
ABC transporter family protein {ECO:0000313|EMBL:EQG74557.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
N2_064_000G1_scaffold_257_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7413..8702
DNA (1290bp) protein (430aa)
ABC-2 transporter family protein Tax=Clostridium difficile RepID=T3G422_CLODC
multidrug family ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:CKG81926.1}; ABC-type transport system, multidrug-family permease {ECO:0000313|EMBL:CDS89738.1}; ABC-type transport system, multidrug-familypermease {ECO:0000313|EMBL:CEJ99810.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
N2_064_000G1_scaffold_257_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8731..9276
DNA (546bp) protein (182aa)
ABC-type transport system, multidrug-family permease Tax=Clostridium difficile RepID=U4D2Q5_CLODI
multidrug family ABC transporter permease
Putative membrane protein {ECO:0000313|EMBL:EQE59767.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
N2_064_000G1_scaffold_257_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9543..10007)
DNA (465bp) protein (155aa)
Acetyltransferase family protein Tax=Clostridium difficile RepID=T3G6P1_CLODC
putative FemA-like peptidoglycan biosynthesisprotein
Putative FemA-like peptidoglycan biosynthesis protein {ECO:0000313|EMBL:CAJ70055.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
N2_064_000G1_scaffold_257_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11022..11849)
DNA (828bp) protein (276aa)
Mitochondria biogenesis AIM24 family protein Tax=Clostridium difficile RepID=T3G500_CLODC
Transcriptional regulator, TRAP family
Mitochondria biogenesis AIM24 family protein {ECO:0000313|EMBL:EQE59779.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
N2_064_000G1_scaffold_257_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12441..12932
DNA (492bp) protein (164aa)
SsrA-binding protein Tax=Clostridium difficile RepID=SSRP_CLOD6
smpB; SsrA-binding protein
SsrA-binding protein {ECO:0000255|HAMAP-Rule:MF_00023}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
N2_064_000G1_scaffold_257_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13771..13986
DNA (216bp) protein (72aa)
Uncharacterized protein Tax=Clostridium difficile RepID=T3G979_CLODC
conserved hypothetical protein
Transcriptional regulator {ECO:0000313|EMBL:CKG82072.1}; Uncharacterized protein {ECO:0000313|EMBL:CDS89727.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
N2_064_000G1_scaffold_257_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13986..14465
DNA (480bp) protein (160aa)
Uncharacterized protein Tax=Clostridium difficile RepID=T3G859_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE59781.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
N2_064_000G1_scaffold_257_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14465..14701
DNA (237bp) protein (79aa)
Uncharacterized protein Tax=Clostridium difficile RepID=F3Y652_CLOD6
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA62892.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
N2_064_000G1_scaffold_257_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14817..15983)
DNA (1167bp) protein (389aa)
Phage integrase family protein Tax=Clostridium difficile RepID=T3G4Z5_CLODC
phage integrase
Phage integrase {ECO:0000313|EMBL:CAJ70050.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
N2_064_000G1_scaffold_257_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15973..16725)
DNA (753bp) protein (251aa)
Fic/DOC family protein Tax=Clostridium difficile RepID=T3G6Q9_CLODC
putative Fic/Doc-related protein
Filamentation induced by cAMP protein fic {ECO:0000313|EMBL:CKG82215.1}; Putative Fic/Doc-related protein {ECO:0000313|EMBL:CEJ99801.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
N2_064_000G1_scaffold_257_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16817..17308)
DNA (492bp) protein (164aa)
Helix-turn-helix family protein Tax=Clostridium difficile RepID=T3G974_CLODC
Transcriptional regulator, Phage-type
Phage repressor {ECO:0000313|EMBL:CKG82252.1}; Transcriptional regulator, Phage-type {ECO:0000313|EMBL:CEJ99800.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
N2_064_000G1_scaffold_257_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17378..17521)
DNA (144bp) protein (48aa)
Uncharacterized protein Tax=Clostridium difficile RepID=G6BPP9_CLODI
Putative phage domain protein {ECO:0000313|EMBL:EQE59762.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
hypothetical protein
N2_064_000G1_scaffold_257_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17560..18321)
DNA (762bp) protein (254aa)
Helix-turn-helix family protein Tax=Clostridium difficile RepID=T3G436_CLODC
Transcriptional regulator, Phage-type
Phage DNA-binding protein {ECO:0000313|EMBL:CKG82308.1}; Transcriptional regulator, Phage-type {ECO:0000313|EMBL:CEJ99798.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
N2_064_000G1_scaffold_257_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18468..18668
DNA (201bp) protein (67aa)
Helix-turn-helix family protein Tax=Clostridium difficile RepID=T3G4Z0_CLODC
Transcriptional regulator, Phage-type
Helix-turn-helix family protein {ECO:0000313|EMBL:EQE59798.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
N2_064_000G1_scaffold_257_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18672..18986
DNA (315bp) protein (105aa)
Excisionase from transposon Tn916 family protein Tax=Clostridium difficile RepID=C9XR66_CLODC
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKG82368.1}; Uncharacterized protein {ECO:0000313|EMBL:CDS92926.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
N2_064_000G1_scaffold_257_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19008..19751
DNA (744bp) protein (248aa)
Putative phage protein Tax=Clostridium difficile RepID=T3G968_CLODC
Putative phage protein {ECO:0000313|EMBL:EQE59771.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
putative phage protein
N2_064_000G1_scaffold_257_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20457..22370)
DNA (1914bp) protein (638aa)
Uncharacterized protein Tax=Clostridium difficile RepID=T3G511_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE59820.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
N2_064_000G1_scaffold_257_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22372..25899)
DNA (3528bp) protein (1176aa)
Helicase conserved C-terminal domain protein Tax=Clostridium difficile RepID=T3G6S2_CLODC
DNA helicase
DNA helicase {ECO:0000313|EMBL:CAJ70042.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
N2_064_000G1_scaffold_257_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25917..28535)
DNA (2619bp) protein (873aa)
Uncharacterized protein Tax=Clostridium difficile RepID=Q184Y4_CLOD6
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ70041.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
N2_064_000G1_scaffold_257_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28847..30472
DNA (1626bp) protein (542aa)
Cytosine-specific methyltransferase Tax=Clostridium difficile RepID=Q184Y5_CLOD6
putative DNA-methyltransferase
Putative DNA-methyltransferase {ECO:0000313|EMBL:CAJ70040.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
N2_064_000G1_scaffold_257_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31139..31240)
DNA (102bp) protein (34aa)
Uncharacterised protein {ECO:0000313|EMBL:CKG82530.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
N2_064_000G1_scaffold_257_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31472..31741)
DNA (270bp) protein (90aa)
Sortase, SrtB family Tax=Clostridium difficile RepID=G6BPS7_CLODI
Sortase, SrtB family {ECO:0000313|EMBL:CCL23534.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
peptidase C60B
N2_064_000G1_scaffold_257_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32313..35858
DNA (3546bp) protein (1182aa)
Putative serine-aspartate repeat-containing protein SdrF Tax=Clostridium difficile RepID=Q184Y2_CLOD6
cbpA; putative serine-aspartate repeat-containingprotein SdrF
Putative serine-aspartate repeat-containingprotein SdrF {ECO:0000313|EMBL:CEJ99787.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
N2_064_000G1_scaffold_257_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36620..37582
DNA (963bp) protein (321aa)
Transcriptional regulator family protein Tax=Clostridium difficile RepID=T3G4M7_CLODC
Transcriptional regulator, DeoR family
Transcriptional regulator {ECO:0000313|EMBL:CKG82638.1}; Transcriptional regulator, DeoR family {ECO:0000313|EMBL:CEJ99786.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Displaying items 1-30 of 56 in total

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