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N2_064_000G1_scaffold_263

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Displaying items 1-30 of 54 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
N2_064_000G1_scaffold_263_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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371..2560
DNA (2190bp) protein (730aa)
putative ribonucleotide-diphosphate reductase (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:EQG77713.1}; EC=1.17.4.1 {ECO:0000313|EMBL:EQG77713.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent Tax=Clostridium difficile RepID=T3HTG2_CLODC
N2_064_000G1_scaffold_263_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2628..3395
DNA (768bp) protein (256aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Ribonuclease HII Tax=Clostridium difficile RepID=RNH2_CLOD6
rnhB; ribonuclease HII
N2_064_000G1_scaffold_263_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3453..4469
DNA (1017bp) protein (339aa)
Nitronate monooxygenase family protein Tax=Clostridium difficile RepID=T3HQF1_CLODC
putative FMN-dependent dehydrogenase
Nitronate monooxygenase family protein {ECO:0000313|EMBL:EQG78025.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
N2_064_000G1_scaffold_263_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4535..4783
DNA (249bp) protein (83aa)
Uncharacterized protein Tax=Clostridium difficile RepID=T3HVC6_CLODC
uncharacterised protein
Uncharacterized protein {ECO:0000313|EMBL:CCL01185.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
N2_064_000G1_scaffold_263_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4959..5456)
DNA (498bp) protein (166aa)
CarD-like/TRCF domain protein Tax=Clostridium difficile RepID=T3HWA7_CLODC
Transcriptional regulator, CarD family
Transcriptional regulator, CarD family {ECO:0000313|EMBL:CCL21362.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
N2_064_000G1_scaffold_263_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5700..6782)
DNA (1083bp) protein (361aa)
ABC-type transport system, multidrug-family permease Tax=Clostridium difficile RepID=U4ACQ1_CLODI
ABC-type transport system, multidrug-family permease {ECO:0000313|EMBL:CCL21363.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
ABC-type transport system, multidrug-familypermease
N2_064_000G1_scaffold_263_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6767..7864)
DNA (1098bp) protein (366aa)
ABC-type transport system, multidrug-family permease Tax=Clostridium difficile RepID=Q18BD0_CLOD6
ABC-type transport system, multidrug-familypermease
ABC-2 type transporter family protein {ECO:0000313|EMBL:EQI01043.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
N2_064_000G1_scaffold_263_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7878..8813)
DNA (936bp) protein (312aa)
ABC-type transport system, multidrug-familyATP-binding protein (EC:3.6.3.-)
ABC-type transport system, multidrug-family ATP-binding protein {ECO:0000313|EMBL:CAJ68124.1}; EC=3.6.3.- {ECO:0000313|EMBL:CAJ68124.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
ABC transporter family protein Tax=Clostridium difficile RepID=T3HQB1_CLODC
N2_064_000G1_scaffold_263_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8942..9640)
DNA (699bp) protein (233aa)
Two-component response regulator Tax=Clostridium difficile RepID=U3ZDG8_CLODI
Two-component response regulator {ECO:0000313|EMBL:CDT79305.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
two-component response regulator
N2_064_000G1_scaffold_263_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9582..10745)
DNA (1164bp) protein (388aa)
Two-component sensor histidine kinase Tax=Clostridium difficile RepID=Q18BD5_CLOD6
Two-component sensor histidine kinase
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein {ECO:0000313|EMBL:EQG77618.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
N2_064_000G1_scaffold_263_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10929..11273
DNA (345bp) protein (115aa)
UPF0102 protein CD630_12710 Tax=Clostridium difficile RepID=Y1271_CLOD6
putative restriction endonuclease
UPF0102 protein BN172_1890010 {ECO:0000256|HAMAP-Rule:MF_00048}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
N2_064_000G1_scaffold_263_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11304..12905
DNA (1602bp) protein (534aa)
putative magnesium chelatase (EC:6.6.1.1)
Putative magnesium chelatase {ECO:0000313|EMBL:CCL21369.1}; EC=6.6.1.1 {ECO:0000313|EMBL:CCL21369.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Sigma-54 interaction domain protein Tax=Clostridium difficile RepID=T3HTC3_CLODC
N2_064_000G1_scaffold_263_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12924..14024
DNA (1101bp) protein (367aa)
DNA protecting protein DprA Tax=Clostridium difficile RepID=G6BWA9_CLODI
putative DNA processing Smf single strandbinding protein
DNA protecting protein DprA {ECO:0000313|EMBL:EQI01049.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
N2_064_000G1_scaffold_263_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14057..16144
DNA (2088bp) protein (696aa)
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
DNA topoisomerase 1 Tax=Clostridium difficile RepID=C9XP03_CLODC
N2_064_000G1_scaffold_263_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16309..17094
DNA (786bp) protein (262aa)
GTP-sensing transcriptional pleiotropic repressor CodY Tax=Clostridium difficile RepID=C9XP04_CLODC
transcriptional repressor CodY
GTP-sensing transcriptional pleiotropic repressor CodY {ECO:0000256|HAMAP-Rule:MF_00621, ECO:0000256|SAAS:SAAS00044533}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
N2_064_000G1_scaffold_263_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17201..18466
DNA (1266bp) protein (422aa)
Sigma-54 interaction domain protein Tax=Clostridium difficile RepID=T3HT72_CLODC
putative replication-associated recombinationprotein a rara
Putative replication-associated recombination protein A RarA {ECO:0000313|EMBL:CCL21373.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
N2_064_000G1_scaffold_263_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18497..19267
DNA (771bp) protein (257aa)
Acetyltransferase family protein Tax=Clostridium difficile RepID=T3HRF0_CLODC
putative acetyltransferase
Acetyltransferase family protein {ECO:0000313|EMBL:EQE67374.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
N2_064_000G1_scaffold_263_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19376..19822
DNA (447bp) protein (149aa)
RRF2-family transcriptional regulator Tax=Clostridium difficile RepID=C9XP07_CLODC
iscR; Rrf2 family transcriptional regulator
Transcriptional regulator, Rrf2 family (Transcriptional regulator of cysteine biosynthesis) {ECO:0000313|EMBL:CCL29346.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
N2_064_000G1_scaffold_263_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19840..21033
DNA (1194bp) protein (398aa)
iscS2; Cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase IscS {ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|SAAS:SAAS00063383};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Cysteine desulfurase Tax=Clostridium difficile RepID=T3HV32_CLODC
N2_064_000G1_scaffold_263_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21087..21527
DNA (441bp) protein (147aa)
FeS cluster assembly scaffold protein NifU Tax=Clostridium difficile RepID=C9XP09_CLODC
NifU-like protein
FeS cluster assembly scaffold protein NifU {ECO:0000313|EMBL:EQE67338.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
N2_064_000G1_scaffold_263_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21816..22895
DNA (1080bp) protein (360aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
tRNA-specific 2-thiouridylase MnmA Tax=Clostridium difficile RepID=MNMA_CLOD6
trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
N2_064_000G1_scaffold_263_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


23344..25983
DNA (2640bp) protein (880aa)
Alanine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00036}; EC=6.1.1.7 {ECO:0000255|HAMAP-Rule:MF_00036};; Alanyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00036}; Short=AlaRS {ECO:0000255|HAMAP-Rule:MF_00036};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Alanine--tRNA ligase Tax=Clostridium difficile RepID=SYA_CLOD6
alaS; alanyl-tRNA synthetase
N2_064_000G1_scaffold_263_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26008..26265
DNA (258bp) protein (86aa)
UPF0297 protein CD630_12830 Tax=Clostridium difficile RepID=Y1283_CLOD6
hypothetical protein
UPF0297 protein BN174_1320032 {ECO:0000256|HAMAP-Rule:MF_01507}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
N2_064_000G1_scaffold_263_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26290..28446
DNA (2157bp) protein (719aa)
Putative membrane protein Tax=Clostridium difficile RepID=T3HQ41_CLODC
putative membrane protein
Alkaline phosphatase-like protein {ECO:0000313|EMBL:CKG99374.1}; Putative membrane protein {ECO:0000313|EMBL:CEJ97863.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
N2_064_000G1_scaffold_263_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28652..29077
DNA (426bp) protein (142aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
Putative Holliday junction resolvase Tax=Clostridium difficile RepID=RUVX_CLOD6
putative Holliday junction resolvase
N2_064_000G1_scaffold_263_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29101..29442
DNA (342bp) protein (114aa)
UPF0473 protein HMPREF1122_01904 Tax=Clostridium difficile RepID=G6B7M8_CLODI
UPF0473 protein BN1095_340009 {ECO:0000256|HAMAP-Rule:MF_01448}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
hypothetical protein
N2_064_000G1_scaffold_263_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29724..30182
DNA (459bp) protein (153aa)
Ferric uptake regulation protein Tax=Clostridium difficile RepID=C9XP16_CLODC
ferric uptake regulation protein
Transcriptional regulator, Fur family {ECO:0000313|EMBL:CCL01208.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
N2_064_000G1_scaffold_263_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30299..31036)
DNA (738bp) protein (246aa)
Uncharacterized protein Tax=Clostridium difficile RepID=T2U3E9_CLODI
membrane-bound metal-dependent hydrolase
Putative membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:EHJ30509.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
N2_064_000G1_scaffold_263_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31187..32929
DNA (1743bp) protein (581aa)
Ribonuclease J family protein Tax=Clostridium difficile RepID=U3UIR1_CLODI
Ribonuclease J family protein {ECO:0000313|EMBL:CCL29360.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
metallo-beta-lactamase
N2_064_000G1_scaffold_263_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33136..33336
DNA (201bp) protein (67aa)
Uncharacterized protein Tax=Clostridium difficile RepID=G6B7M4_CLODI
small acid-soluble spore protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ30507.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
Displaying items 1-30 of 54 in total

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