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N2_064_000G1_scaffold_460

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Displaying items 1-30 of 36 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
N2_064_000G1_scaffold_460_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(358..1617)
DNA (1260bp) protein (420aa)
Transporter, Major Facilitator Superfamily (MFS) Tax=Clostridium difficile RepID=Q182A7_CLOD6
Transporter, Major Facilitator Superfamily(MFS)
Transporter, Major Facilitator Superfamily (MFS) {ECO:0000313|EMBL:CCL22756.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
N2_064_000G1_scaffold_460_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1641..2849)
DNA (1209bp) protein (403aa)
putative pyridoxal phosphate-dependenttransferase (EC:2.6.1.-)
Aminotransferase, class I/II Tax=Clostridium difficile RepID=G6BZG7_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQH98628.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
N2_064_000G1_scaffold_460_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2879..3772)
DNA (894bp) protein (298aa)
Phosphate butyryltransferase Tax=Clostridium difficile RepID=C9XLK7_CLODC
phosphate butyryltransferase
Phosphate acetyl/butaryl transferase family protein {ECO:0000313|EMBL:EQE61012.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
N2_064_000G1_scaffold_460_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3790..4848)
DNA (1059bp) protein (353aa)
butyrate kinase (EC:2.7.2.7)
Probable butyrate kinase {ECO:0000256|HAMAP-Rule:MF_00542}; Short=BK {ECO:0000256|HAMAP-Rule:MF_00542};; EC=2.7.2.7 {ECO:0000256|HAMAP-Rule:MF_00542};; Branched-chain carboxylic acid kinase {ECO:0000256|HAMAP-Rule:MF_00542}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Probable butyrate kinase Tax=Clostridium difficile RepID=C9XLK8_CLODC
N2_064_000G1_scaffold_460_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5005..5544)
DNA (540bp) protein (180aa)
Putative flavodoxin/ferredoxin oxidoreductase gamma subunit {ECO:0000313|EMBL:CCL22760.1}; EC=1.2.7.- {ECO:0000313|EMBL:CCL22760.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
2-oxoacid:ferredoxin/flavodoxin oxidoreductase, gamma subunit Tax=Clostridium difficile RepID=G6BCT4_CLODI
oxidoreductase subunit
N2_064_000G1_scaffold_460_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5557..6276)
DNA (720bp) protein (240aa)
Putative flavodoxin/ferredoxin oxidoreductase beta subunit {ECO:0000313|EMBL:CCL30662.1}; EC=1.2.7.- {ECO:0000313|EMBL:CCL30662.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
Thiamine pyrophosphate enzyme, TPP binding domain protein Tax=Clostridium difficile RepID=G6BZH1_CLODI
oxidoreductase subunit
N2_064_000G1_scaffold_460_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6279..7355)
DNA (1077bp) protein (359aa)
Putative flavodoxin/ferredoxin oxidoreductase alpha subunit {ECO:0000313|EMBL:CCL22762.1}; EC=1.2.7.- {ECO:0000313|EMBL:CCL22762.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding domain protein Tax=Clostridium difficile RepID=D5Q2M0_CLODI
oxidoreductase subunit
N2_064_000G1_scaffold_460_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7384..7581)
DNA (198bp) protein (66aa)
4Fe-4S binding domain protein Tax=Clostridium difficile RepID=D5Q2L9_CLODI
oxidoreductase ferredoxin subunit
4Fe-4S binding domain protein {ECO:0000313|EMBL:EQG75803.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
N2_064_000G1_scaffold_460_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7864..8631)
DNA (768bp) protein (256aa)
Bacterial transcriptional regulator family protein Tax=Clostridium difficile RepID=C9XLL3_CLODC
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:CCL30665.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
N2_064_000G1_scaffold_460_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8911..10458
DNA (1548bp) protein (516aa)
Nitrite/sulfite reductase {ECO:0000313|EMBL:CKH32105.1}; EC=1.8.7.1 {ECO:0000313|EMBL:CKH32105.1};; Putative nitrite/sulphite reductase {ECO:0000313|EMBL:CDS85417.1}; EC=1.8.1.2 {ECO:0000313|EMBL:CDS85417.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Nitrite/Sulfite reductase ferredoxin-like half domain protein Tax=Clostridium difficile RepID=C9XLL4_CLODC
nitrite/sulfite reductase
N2_064_000G1_scaffold_460_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10624..12690)
DNA (2067bp) protein (689aa)
Glycine--tRNA ligase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255}; EC=6.1.1.14 {ECO:0000255|HAMAP-Rule:MF_00255};; Glycyl-tRNA synthetase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255}; Short=GlyRS {ECO:0000255|HAMAP-Rule:MF_00255};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
glyS; Glycyl-tRNA synthetase beta subunit(Glycine--tRNA ligase beta subunit) (GlyRS) (EC:6.1.1.14)
Glycine--tRNA ligase beta subunit Tax=Clostridium difficile RepID=SYGB_CLOD6
N2_064_000G1_scaffold_460_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12690..13568)
DNA (879bp) protein (293aa)
glyQ; glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
Glycine--tRNA ligase alpha subunit Tax=Clostridium difficile RepID=SYGA_CLOD6
N2_064_000G1_scaffold_460_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13728..14330)
DNA (603bp) protein (201aa)
Uncharacterized protein Tax=Clostridium difficile RepID=Q182C1_CLOD6
uncharacterised protein
Uncharacterized protein {ECO:0000313|EMBL:CCK87772.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T5.;"
N2_064_000G1_scaffold_460_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14320..15093)
DNA (774bp) protein (258aa)
DNA repair protein RecO Tax=Clostridium difficile RepID=RECO_CLOD6
recO; DNA repair protein RecO (Recombination proteinO)
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
N2_064_000G1_scaffold_460_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15059..15214)
DNA (156bp) protein (52aa)
YqzL-like family protein Tax=Clostridium difficile RepID=T3GF77_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL30671.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
N2_064_000G1_scaffold_460_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15287..16666)
DNA (1380bp) protein (460aa)
Magnesium transporter Tax=Clostridium difficile RepID=C9XLL9_CLODC
Mg2+ transporter
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
N2_064_000G1_scaffold_460_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16678..17571)
DNA (894bp) protein (298aa)
GTPase Era Tax=Clostridium difficile RepID=ERA_CLOD6
era; GTPase Era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;"
N2_064_000G1_scaffold_460_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17635..18036)
DNA (402bp) protein (134aa)
Cytidine deaminase {ECO:0000313|EMBL:EQE61002.1}; EC=3.5.4.5 {ECO:0000313|EMBL:EQE61002.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Cytidine deaminase Tax=Clostridium difficile RepID=C9XLM1_CLODC
cytidine deaminase
N2_064_000G1_scaffold_460_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18155..18874)
DNA (720bp) protein (240aa)
PAP2 superfamily protein Tax=Clostridium difficile RepID=C9XLM2_CLODC
membrane-associated kinase and phosphatase
PAP2 family protein {ECO:0000313|EMBL:EFH07731.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP08.;"
N2_064_000G1_scaffold_460_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18880..19341)
DNA (462bp) protein (154aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
Endoribonuclease YbeY Tax=Clostridium difficile RepID=YBEY_CLOD6
hypothetical protein
N2_064_000G1_scaffold_460_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19398..20513)
DNA (1116bp) protein (372aa)
PhoH-like protein Tax=Clostridium difficile RepID=U3WMD8_CLODI
PhoH-like protein {ECO:0000313|EMBL:CCL30677.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
PhoH-like protein
N2_064_000G1_scaffold_460_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20452..21795)
DNA (1344bp) protein (448aa)
Sporulation protein YqfD Tax=Clostridium difficile RepID=T3GIL0_CLODC
spoIV; Stage IV sporulation protein
Putative stage IV sporulation protein {ECO:0000313|EMBL:CKH32508.1}; Stage IV sporulation protein {ECO:0000313|EMBL:CEJ99062.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
N2_064_000G1_scaffold_460_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21808..22050)
DNA (243bp) protein (81aa)
Uncharacterized protein Tax=Clostridium difficile RepID=C9XLM6_CLODC
hypothetical protein
Putative sporulation protein YqfC {ECO:0000313|EMBL:EFH07727.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP08.;"
N2_064_000G1_scaffold_460_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22257..22820)
DNA (564bp) protein (188aa)
Ribosomal subunit interface protein Tax=Clostridium difficile RepID=G6BCV3_CLODI
sigma 54 modulation protein
Ribosomal subunit interface protein {ECO:0000313|EMBL:EHJ25265.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
N2_064_000G1_scaffold_460_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23013..23510)
DNA (498bp) protein (166aa)
Probale sensory protein Tax=Clostridium difficile RepID=C9XLM8_CLODC
hypothetical protein
Putative transmembrane signaling protein,TspO/MBR family {ECO:0000313|EMBL:CCL22780.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
N2_064_000G1_scaffold_460_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23621..24064)
DNA (444bp) protein (148aa)
YqeY-like protein Tax=Clostridium difficile RepID=D5Q2K1_CLODI
rpsU; tRNA binding protein
Putative aspartyl/glutamyl-tRNA amidotransferase subunit B-related {ECO:0000313|EMBL:CCL30682.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
N2_064_000G1_scaffold_460_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24094..24273)
DNA (180bp) protein (60aa)
30S ribosomal protein S21 Tax=Clostridium difficile RepID=RS21_CLOD6
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
N2_064_000G1_scaffold_460_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24436..24786)
DNA (351bp) protein (117aa)
HIT domain protein Tax=Clostridium difficile RepID=C9XLN1_CLODC
histidine triad nucleotide-binding protein
Putative histidine triad (HIT) protein {ECO:0000313|EMBL:CCL22783.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
N2_064_000G1_scaffold_460_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24829..26127)
DNA (1299bp) protein (433aa)
tRNA methylthiotransferase YqeV Tax=Clostridium difficile RepID=G6BZJ4_CLODI
radical SAM protein
Putative MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:CCL22784.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
N2_064_000G1_scaffold_460_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26129..26887)
DNA (759bp) protein (253aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
Ribosomal RNA small subunit methyltransferase E Tax=Clostridium difficile RepID=C9XLN3_CLODC
hypothetical protein
Displaying items 1-30 of 36 in total

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