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N2_064_000G1_scaffold_861

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
N2_064_000G1_scaffold_861_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..246)
DNA (246bp) protein (82aa)
RNA polymerase sigma factor RpoS Tax=Escherichia coli RepID=R9U5K1_ECO57
rpoS; RNA polymerase, sigma S (sigma 38) factor
RNA polymerase sigma factor RpoS {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma S {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma-38 {ECO:0000256|HAMAP-Rule:MF_00959}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
N2_064_000G1_scaffold_861_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(309..1448)
DNA (1140bp) protein (380aa)
Murein hydrolase activator NlpD Tax=Enterobacteriaceae RepID=NLPD_ECOLI
nlpD; lipoprotein NlpD
Murein hydrolase activator NlpD {ECO:0000313|EMBL:EZJ72449.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-182-04_S3_C3.;"
N2_064_000G1_scaffold_861_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1588..2214)
DNA (627bp) protein (209aa)
Protein-L-isoaspartate O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000256|HAMAP-Rule:MF_00090};; L-isoaspartyl protein carboxyl methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; Protein L-isoaspartyl methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; Protein-beta-aspartate methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
Protein-L-isoaspartate O-methyltransferase Tax=Enterobacteriaceae RepID=PIMT_ECO24
pcm; protein-L-isoaspartate O-methyltransferase
N2_064_000G1_scaffold_861_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2208..2969)
DNA (762bp) protein (254aa)
surE; stationary phase survival protein SurE (EC:3.1.3.6)
5'/3'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; EC=3.1.3.6 {ECO:0000256|HAMAP-Rule:MF_00060};; Exopolyphosphatase {ECO:0000256|HAMAP-Rule:MF_00060}; Nucleoside monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
5'/3'-nucleotidase SurE Tax=Escherichia RepID=B1LQ64_ECOSM
N2_064_000G1_scaffold_861_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2950..3999)
DNA (1050bp) protein (350aa)
tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseudouridylate synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA-uridine isomerase D {ECO:0000256|HAMAP-Rule:MF_01082}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
tRNA pseudouridine synthase D Tax=Escherichia coli RepID=TRUD_ECO24
tRNA pseudouridine synthase D
N2_064_000G1_scaffold_861_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3996..4475)
DNA (480bp) protein (160aa)
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O123:H11 str. 2009C-3307.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Tax=Escherichia coli RepID=L2XFD4_ECOLX
N2_064_000G1_scaffold_861_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4475..5185)
DNA (711bp) protein (237aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 115-1.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Tax=Escherichia coli RepID=D7Y5T2_ECOLX
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
N2_064_000G1_scaffold_861_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5204..5515)
DNA (312bp) protein (104aa)
Cell division protein FtsB Tax=Enterobacteriaceae RepID=FTSB_ECO24
ftsB; cell division protein FtsB
Cell division protein FtsB {ECO:0000256|HAMAP-Rule:MF_00599, ECO:0000256|SAAS:SAAS00014481}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 175-1.;"
N2_064_000G1_scaffold_861_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5709..6032)
DNA (324bp) protein (108aa)
Inner membrane protein YgbE Tax=Enterobacteriaceae RepID=YGBE_ECOLI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EHW13932.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
N2_064_000G1_scaffold_861_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6082..6687)
DNA (606bp) protein (202aa)
cysC; adenylylsulfate kinase (EC:2.7.1.25)
Adenylyl-sulfate kinase {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347}; EC=2.7.1.25 {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347};; APS kinase {ECO:0000256|HAMAP-Rule:MF_00065}; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00065}; Adenosine-5'-phosphosulfate kinase {ECO:0000256|HAMAP-Rule:MF_00065}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli STEC_DG131-3.;"
Adenylyl-sulfate kinase Tax=Gammaproteobacteria RepID=CYSC_ECO24
N2_064_000G1_scaffold_861_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6687..8114)
DNA (1428bp) protein (476aa)
Sulfate adenylyltransferase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00062, ECO:0000256|SAAS:SAAS00056000}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00062, ECO:0000256|SAAS:SAAS00055979};; ATP-sulfurylase large subunit {ECO:0000256|HAMAP-Rule:MF_00062}; Sulfate adenylate transferase {ECO:0000256|HAMAP-Rule:MF_00062}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE37.;"
Sulfate adenylyltransferase subunit 1 Tax=Enterobacteriaceae RepID=CYSN_ECO7I
cysN; sulfate adenylyltransferase, subunit 1
N2_064_000G1_scaffold_861_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8116..9024)
DNA (909bp) protein (303aa)
sulfate adenylyltransferase subunit 2 (EC:2.7.7.4)
Sulfate adenylyltransferase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00064}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00064};; ATP-sulfurylase small subunit {ECO:0000256|HAMAP-Rule:MF_00064}; Sulfate adenylate transferase {ECO:0000256|HAMAP-Rule:MF_00064}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 174750.;"
Sulfate adenylyltransferase subunit 2 Tax=Enterobacteriaceae RepID=CYSD_ECO55
N2_064_000G1_scaffold_861_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9276..10313
DNA (1038bp) protein (346aa)
Alkaline phosphatase isozyme conversion, aminopeptidase Tax=Enterobacteriaceae RepID=J7R4T7_ECOLX
alkaline phosphatase isozyme conversion aminopeptidase
Peptidase M28 family protein {ECO:0000313|EMBL:EHU10841.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1B.;"
N2_064_000G1_scaffold_861_14
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10808..11122
DNA (315bp) protein (105aa)
Uncharacterized protein Tax=Salmonella enterica subsp. enterica serovar Thompson str. ATCC 8391 RepID=V1JNL5_SALTH
Uncharacterized protein {ECO:0000313|EMBL:CBY97127.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Weltevreden str.; 2007-60-3289-1.;"
Hypothetical protein
N2_064_000G1_scaffold_861_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11680..11973)
DNA (294bp) protein (98aa)
CRISPR-associated protein Cas2 Tax=Enterobacteriaceae RepID=B2TZH7_SHIB3
hypothetical protein
CRISPR-associated endoribonuclease Cas2, subtype I-E {ECO:0000313|EMBL:EII34621.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4.0967.;"
N2_064_000G1_scaffold_861_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11970..12893)
DNA (924bp) protein (308aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_B_14.;"
CRISPR-associated endonuclease Cas1 Tax=Enterobacteriaceae RepID=M4JQI6_ECOLX
CRISPR-associated protein Cas1
N2_064_000G1_scaffold_861_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12890..13213)
DNA (324bp) protein (108aa)
CRISPR-associated protein cas6/cse3/casE Tax=Enterobacteriaceae RepID=K3IK19_ECOLX
hypothetical protein
CRISPR-associated protein cas6/cse3/case, subtype I-e {ECO:0000313|EMBL:ELD68572.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE234.;"
N2_064_000G1_scaffold_861_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13332..13541)
DNA (210bp) protein (70aa)
CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E Tax=Escherichia coli RepID=M8LU32_ECOLX
CRISPR-associated protein cas6/cse3/case, subtype I-e {ECO:0000313|EMBL:EOV56070.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
hypothetical protein
N2_064_000G1_scaffold_861_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13523..14269)
DNA (747bp) protein (249aa)
CRISPR system CASCADE complex protein CasD Tax=Escherichia coli RepID=D7Y597_ECOLX
CRISPR-associated protein cas5/casd, subtype I-e {ECO:0000313|EMBL:EOV56071.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
hypothetical protein
N2_064_000G1_scaffold_861_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14280..15335)
DNA (1056bp) protein (352aa)
CRISPR system CASCADE complex protein CasC Tax=Escherichia coli RepID=D7Y598_ECOLX
CRISPR-associated protein cas7/cse4/casc, subtype I-e {ECO:0000313|EMBL:EOV56072.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
hypothetical protein
N2_064_000G1_scaffold_861_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15347..15883)
DNA (537bp) protein (179aa)
Uncharacterized protein Tax=Escherichia coli RepID=J7R843_ECOLX
hypothetical protein
CRISPR type I-e/-associated protein casb/cse2 {ECO:0000313|EMBL:ESP07723.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 36 (4-5675286).;"
N2_064_000G1_scaffold_861_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15880..17442)
DNA (1563bp) protein (521aa)
CRISPR system CASCADE complex protein CasA Tax=Escherichia coli RepID=D7Y5A0_ECOLX
CRISPR type I-e/-associated protein casa/cse1 {ECO:0000313|EMBL:EOV56074.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
hypothetical protein
N2_064_000G1_scaffold_861_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17540..18193)
DNA (654bp) protein (218aa)
CRISPR-associated endonuclease Cas3-HD Tax=Escherichia coli 2866550 RepID=M8U289_ECOLX
CRISPR-associated helicase Cas3
Putative helicase {ECO:0000313|EMBL:EGU98057.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 79-10.;"
Displaying 23 items

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