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N2_066_000G1_scaffold_179

Search features with annotation key words

Displaying items 1-30 of 70 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
N2_066_000G1_scaffold_179_trna_4
unknown

Not on your lists

comp(1..73)
DNA (73bp)
transferRNA Lys
N2_066_000G1_scaffold_179_1
unknown

Not on your lists

comp(64..189)
DNA (126bp) protein (42aa)

This feature has no annotations

N2_066_000G1_scaffold_179_trna_3
unknown

Not on your lists

comp(294..367)
DNA (74bp)
transferRNA Arg
N2_066_000G1_scaffold_179_trna_2
unknown

Not on your lists

comp(374..447)
DNA (74bp)
transferRNA Pro
N2_066_000G1_scaffold_179_2
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(494..1921)
DNA (1428bp) protein (476aa)
UPI0003D61EE7 related cluster Tax=unknown RepID=UPI0003D61EE7
APC family amino acid-polyamine-organocation transporter {ECO:0000313|EMBL:ETI84996.1}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
rocC; amino acid permease rocC
N2_066_000G1_scaffold_179_3
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1918..2355)
DNA (438bp) protein (146aa)
UPI0003D5D518 related cluster Tax=unknown RepID=UPI0003D5D518
Uncharacterized protein {ECO:0000313|EMBL:KGF12307.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
hypothetical protein
N2_066_000G1_scaffold_179_4
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2406..3590)
DNA (1185bp) protein (395aa)
UPI0003D61352 related cluster Tax=unknown RepID=UPI0003D61352
Uncharacterized protein {ECO:0000313|EMBL:ETI84998.1}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
N2_066_000G1_scaffold_179_5
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3601..4689)
DNA (1089bp) protein (363aa)
UPI0003D69717 related cluster Tax=unknown RepID=UPI0003D69717
Permease {ECO:0000313|EMBL:KGF12309.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
Predicted permeases
N2_066_000G1_scaffold_179_6
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4741..5466)
DNA (726bp) protein (242aa)
UPI0003D5E7C2 related cluster Tax=unknown RepID=UPI0003D5E7C2
ABC transporter {ECO:0000313|EMBL:ETI85000.1}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
ABC transporter
N2_066_000G1_scaffold_179_7
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5468..6175)
DNA (708bp) protein (236aa)
UPI0003D60D0A related cluster Tax=unknown RepID=UPI0003D60D0A
OstA-like protein {ECO:0000313|EMBL:ETI85001.1}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
OstA family protein
N2_066_000G1_scaffold_179_8
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6172..6717)
DNA (546bp) protein (182aa)
UPI0003D69382 related cluster Tax=unknown RepID=UPI0003D69382
Uncharacterized protein {ECO:0000313|EMBL:KGF12312.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
hypothetical protein
N2_066_000G1_scaffold_179_9
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6714..7631)
DNA (918bp) protein (306aa)
UPI0003D623A1 related cluster Tax=unknown RepID=UPI0003D623A1
Uncharacterized protein {ECO:0000313|EMBL:KGF12313.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
lipid A biosynthesis acyltransferase
N2_066_000G1_scaffold_179_10
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7651..8184)
DNA (534bp) protein (178aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family (EC:3.1.3.45)
UPI0003D5B542 related cluster Tax=unknown RepID=UPI0003D5B542
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family {ECO:0000313|EMBL:ETI85004.1}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
N2_066_000G1_scaffold_179_11
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8184..9155)
DNA (972bp) protein (324aa)
UPI0003D61308 related cluster Tax=unknown RepID=UPI0003D61308
Uncharacterized protein {ECO:0000313|EMBL:ETI85005.1}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
arabinose 5-phosphate isomerase
N2_066_000G1_scaffold_179_12
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9152..9979)
DNA (828bp) protein (276aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
UPI0003D6369C related cluster Tax=unknown RepID=UPI0003D6369C
2-dehydro-3-deoxyphosphooctonate aldolase
N2_066_000G1_scaffold_179_13
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9957..10724)
DNA (768bp) protein (256aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D6461E related cluster Tax=unknown RepID=UPI0003D6461E
3-deoxy-manno-octulosonate cytidylyltransferase
N2_066_000G1_scaffold_179_14
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10706..11824)
DNA (1119bp) protein (373aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D66883 related cluster Tax=unknown RepID=UPI0003D66883
tetraacyldisaccharide 4'-kinase
N2_066_000G1_scaffold_179_15
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11808..13139)
DNA (1332bp) protein (444aa)
UPI0003D61AC0 related cluster Tax=unknown RepID=UPI0003D61AC0
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:ETI85009.1}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
3-deoxy-D-manno-octulosonic-acid transferase
N2_066_000G1_scaffold_179_16
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13141..14871)
DNA (1731bp) protein (577aa)
UPI0003D62EED related cluster Tax=unknown RepID=UPI0003D62EED
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGF12317.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
lipid A export permease/ATP-binding protein MsbA
N2_066_000G1_scaffold_179_17
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14864..16003)
DNA (1140bp) protein (380aa)
Lipid-A-disaccharide synthase {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200}; EC=2.4.1.182 {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
UPI0003D5AE0B related cluster Tax=unknown RepID=UPI0003D5AE0B
lipid-A-disaccharide synthase
N2_066_000G1_scaffold_179_18
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16000..16824)
DNA (825bp) protein (275aa)
UPI0003D5F513 related cluster Tax=unknown RepID=UPI0003D5F513
Uncharacterized protein {ECO:0000313|EMBL:KGF12319.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
hypothetical protein
N2_066_000G1_scaffold_179_19
unknown

Not on your lists

comp(17038..17223)
DNA (186bp) protein (62aa)

This feature has no annotations

N2_066_000G1_scaffold_179_20
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17787..18002)
DNA (216bp) protein (72aa)
Uncharacterized protein Tax=Eubacterium sp. CAG:603 RepID=R5P3I3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ04256.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
N2_066_000G1_scaffold_179_21
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18451..19263)
DNA (813bp) protein (271aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00064156}; Short=UDP-N-acetylglucosamine acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387};; EC=2.3.1.129 {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00001267};; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D689C6 related cluster Tax=unknown RepID=UPI0003D689C6
acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase
N2_066_000G1_scaffold_179_22
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19443..19883)
DNA (441bp) protein (147aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; Beta-hydroxyacyl-ACP dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
UPI0003D65817 related cluster Tax=unknown RepID=UPI0003D65817
3-hydroxyacyl-ACP dehydratase
N2_066_000G1_scaffold_179_23
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19880..20728)
DNA (849bp) protein (283aa)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041386};; UDP-3-O-acyl-GlcNAc deacetylase {ECO:0000256|HAMAP-Rule:MF_00388}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
UPI0003D5C2F7 related cluster Tax=unknown RepID=UPI0003D5C2F7
UDP-3-0-acyl N-acetylglucosamine deacetylase
N2_066_000G1_scaffold_179_24
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20851..22101)
DNA (1251bp) protein (417aa)
UPI0003D62FA7 related cluster Tax=unknown RepID=UPI0003D62FA7
Aminotransferase {ECO:0000313|EMBL:KGF12328.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
aminotransferase class I and II
N2_066_000G1_scaffold_179_25
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22256..24040)
DNA (1785bp) protein (595aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
UPI0003D5C562 related cluster Tax=unknown RepID=UPI0003D5C562
histidine kinase
N2_066_000G1_scaffold_179_26
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24037..24720)
DNA (684bp) protein (228aa)
UPI0003D5E5FD related cluster Tax=unknown RepID=UPI0003D5E5FD
ArsR family transcriptional regulator {ECO:0000313|EMBL:KGF12330.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
two component transcriptional regulator, winged helix family
N2_066_000G1_scaffold_179_27
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24728..25369)
DNA (642bp) protein (214aa)
UPI0003D5CBF3 related cluster Tax=unknown RepID=UPI0003D5CBF3
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
phosphate uptake regulator, PhoU
Displaying items 1-30 of 70 in total

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