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N2_066_000G1_scaffold_289

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
N2_066_000G1_scaffold_289_1
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..403)
DNA (402bp) protein (134aa)
Alcohol dehydrogenase GroES domain protein Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SUJ7_CLOC7
Alcohol dehydrogenase GroES domain-containing protein
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ADL52952.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
N2_066_000G1_scaffold_289_2
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(504..1868)
DNA (1365bp) protein (455aa)
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:ACD24021.1}; EC=2.1.1.- {ECO:0000313|EMBL:ACD24021.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
RNA methyltransferase Tax=Clostridium botulinum RepID=UPI0002E83447
N2_066_000G1_scaffold_289_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1935..2297)
DNA (363bp) protein (121aa)
Putative uncharacterized protein Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UZX6_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL08126.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
N2_066_000G1_scaffold_289_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3315..4733)
DNA (1419bp) protein (473aa)
pyk; pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504, ECO:0000313|EMBL:AIY83287.1}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504, ECO:0000313|EMBL:AIY83287.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Pyruvate kinase Tax=Clostridium intestinale URNW RepID=U2PZD1_9CLOT
N2_066_000G1_scaffold_289_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4798..5757)
DNA (960bp) protein (320aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
pfkA; 6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase Tax=Clostridium colicanis 209318 RepID=N9WKN8_9CLOT
N2_066_000G1_scaffold_289_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6167..9745)
DNA (3579bp) protein (1193aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170, ECO:0000313|EMBL:AIY84634.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
dnaE; DNA polymerase III, alpha subunit (EC:2.7.7.7)
DNA polymerase III, alpha subunit Tax=Clostridium sp. 7_2_43FAA RepID=V9HIJ6_9CLOT
N2_066_000G1_scaffold_289_7
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9761..10708)
DNA (948bp) protein (316aa)
Sporulation protein Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FY45_CLOPA
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
hypothetical protein
N2_066_000G1_scaffold_289_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10818..12167)
DNA (1350bp) protein (450aa)
Putative gluconeogenesis factor Tax=Clostridium butyricum RepID=B1QWJ8_CLOBU
Putative gluconeogenesis factor {ECO:0000256|HAMAP-Rule:MF_00973}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
N2_066_000G1_scaffold_289_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12164..13042)
DNA (879bp) protein (293aa)
UPF0042 nucleotide-binding protein Tax=Clostridium sp. 7_2_43FAA RepID=V9HH27_9CLOT
P-loop ATPase family protein
Nucleotide-binding protein UC77_06170 {ECO:0000256|HAMAP-Rule:MF_00636}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
N2_066_000G1_scaffold_289_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13443..13766)
DNA (324bp) protein (108aa)
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:AIY83006.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
N2_066_000G1_scaffold_289_11
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13961..14878)
DNA (918bp) protein (306aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
UDP-N-acetylenolpyruvoylglucosamine reductase Tax=Clostridium colicanis 209318 RepID=N9WLA4_9CLOT
murB; UDP-N-acetylenolpyruvoylglucosamine reductase
N2_066_000G1_scaffold_289_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15003..16874)
DNA (1872bp) protein (624aa)
UvrABC system protein C Tax=Clostridium colicanis 209318 RepID=N9Y625_9CLOT
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
uvrC; excinuclease ABC subunit C
N2_066_000G1_scaffold_289_13
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17055..18527)
DNA (1473bp) protein (491aa)
Penicillin-binding protein transpeptidase Tax=Clostridium sp. DL-VIII RepID=G7MAN1_9CLOT
Penicillin-binding protein transpeptidase {ECO:0000313|EMBL:EHJ02290.1}; Flags: Precursor;; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
penicillin-binding protein
N2_066_000G1_scaffold_289_14
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18530..19753)
DNA (1224bp) protein (408aa)
Putative FtsW-like protein RodA Tax=Clostridium intestinale URNW RepID=U2N0S6_9CLOT
Cell division protein FtsW {ECO:0000313|EMBL:KJU72294.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
cell cycle family protein
N2_066_000G1_scaffold_289_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19777..20217)
DNA (441bp) protein (147aa)
FHA-domain containing secreted protein Tax=Clostridium botulinum E RepID=B2UZY8_CLOBA
FHA-domain containing protein
Signal peptide protein {ECO:0000313|EMBL:KIL08135.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
N2_066_000G1_scaffold_289_16
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20314..23136)
DNA (2823bp) protein (941aa)
UvrABC system protein A Tax=Clostridium celatum DSM 1785 RepID=L1QIG7_9CLOT
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
uvrA; UvrABC system protein A
N2_066_000G1_scaffold_289_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23357..24727)
DNA (1371bp) protein (457aa)
KWG repeat-containing protein Tax=Clostridium botulinum A1 str. CFSAN002368 RepID=S8B1J5_CLOBO
hypothetical protein
WG containing repeat family protein {ECO:0000313|EMBL:AJE09628.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum CDC_1436.;"
N2_066_000G1_scaffold_289_18

Not on your lists

comp(24754..26715)
DNA (1962bp) protein (654aa)
UvrABC system protein B Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MWS6_CLOSA
UvrABC system protein B {ECO:0000313|EMBL:ETJ16602.1}; species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
uvrB; UvrABC system protein B
N2_066_000G1_scaffold_289_19
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26976..28268)
DNA (1293bp) protein (431aa)
Uncharacterized protein Tax=Clostridium sp. 7_2_43FAA RepID=V9H4N5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99526.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
N2_066_000G1_scaffold_289_20
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28283..29512)
DNA (1230bp) protein (410aa)
peptidase S41 Tax=Clostridium botulinum RepID=UPI000308F5A3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83016.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
N2_066_000G1_scaffold_289_21
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29582..30472)
DNA (891bp) protein (297aa)
Cell division protein FtsX Tax=Clostridium sp. DL-VIII RepID=G7MAN8_9CLOT
ftsX-like permease family protein
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
N2_066_000G1_scaffold_289_22
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30462..31148)
DNA (687bp) protein (229aa)
Cell division ATP-binding protein FtsE Tax=Clostridium botulinum E RepID=B2UZZ4_CLOBA
ftsE; cell division ATP-binding protein FtsE
ABC transporter {ECO:0000313|EMBL:KIL08141.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
N2_066_000G1_scaffold_289_23
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31312..32166)
DNA (855bp) protein (285aa)
Putative membrane protein Tax=Clostridium botulinum B RepID=B2TQT3_CLOBB
transporter
Transporter {ECO:0000313|EMBL:CDM68236.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
N2_066_000G1_scaffold_289_24
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32291..32443)
DNA (153bp) protein (51aa)
Uncharacterized protein Tax=Clostridium colicanis 209318 RepID=N9WL84_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ03625.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
hypothetical protein
Displaying 24 items

View Taxonomy