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N2_066_000G1_scaffold_206

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Displaying items 1-30 of 61 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
N2_066_000G1_scaffold_206_1
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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47..316
DNA (270bp) protein (90aa)
UvrABC system protein B Tax=Ruminococcus sp. CAG:9 RepID=R7CE67_9FIRM
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
excinuclease ABC, B subunit
N2_066_000G1_scaffold_206_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

709..978
DNA (270bp) protein (90aa)
Putative uncharacterized protein Tax=Eubacterium rectale M104/1 RepID=D4JKF0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK94097.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
N2_066_000G1_scaffold_206_3
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

962..1372
DNA (411bp) protein (137aa)
Uncharacterized protein Tax=Firmicutes bacterium CAG:270 RepID=R7BVF9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD69791.1}; species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
hypothetical protein
N2_066_000G1_scaffold_206_4
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1423..1755)
DNA (333bp) protein (111aa)
Putative uncharacterized protein Tax=Eubacterium rectale DSM 17629 RepID=D6E4E7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK90287.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
N2_066_000G1_scaffold_206_5
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1804..2022
DNA (219bp) protein (73aa)
Uncharacterized protein Tax=Clostridiales RepID=U2PII5_9FIRM
Site-specific recombinase phage integrase family {ECO:0000313|EMBL:CCZ64355.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
N2_066_000G1_scaffold_206_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2184..4184
DNA (2001bp) protein (667aa)
excinuclease ABC subunit B Tax=Ruminococcus sp. JC304 RepID=UPI0002E0EB60
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
excinuclease ABC, B subunit
N2_066_000G1_scaffold_206_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4337..5377
DNA (1041bp) protein (347aa)
Heat-inducible transcription repressor hrcA Tax=Ruminococcus sp. CAG:9 RepID=R7CJU5_9FIRM
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
heat-inducible transcription repressor HrcA
N2_066_000G1_scaffold_206_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5395..6039
DNA (645bp) protein (215aa)
Protein GrpE Tax=Ruminococcus sp. CAG:9 RepID=R7CM99_9FIRM
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Molecular chaperone GrpE (heat shock protein)
N2_066_000G1_scaffold_206_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6100..7977
DNA (1878bp) protein (626aa)
Chaperone protein DnaK Tax=Ruminococcus RepID=C6JG67_9FIRM
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
chaperone protein DnaK
N2_066_000G1_scaffold_206_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8097..9284
DNA (1188bp) protein (396aa)
Chaperone protein DnaJ Tax=Ruminococcus sp. CAG:9 RepID=R7CL83_9FIRM
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
chaperone protein DnaJ
N2_066_000G1_scaffold_206_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9416..10129
DNA (714bp) protein (238aa)
Uncharacterized protein Tax=Ruminococcus RepID=C6JG69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78509.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
PAP2 superfamily.
N2_066_000G1_scaffold_206_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10247..11200
DNA (954bp) protein (318aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
[LSU ribosomal protein L11P]-lysine N-methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG70_9FIRM
N2_066_000G1_scaffold_206_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11205..11951
DNA (747bp) protein (249aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
RNA methyltransferase, RsmE family (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase E Tax=Ruminococcus sp. CAG:9 RepID=R7CJW0_9FIRM
N2_066_000G1_scaffold_206_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11973..13127
DNA (1155bp) protein (385aa)
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes (EC:2.8.1.7)
Uncharacterized protein Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG72_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76051.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
N2_066_000G1_scaffold_206_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13168..14349
DNA (1182bp) protein (394aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Probable tRNA sulfurtransferase Tax=Ruminococcus sp. CAG:9 RepID=R7CKM2_9FIRM
thiazole biosynthesis/tRNA modification protein ThiI
N2_066_000G1_scaffold_206_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14466..14702)
DNA (237bp) protein (79aa)
Uncharacterized protein Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76053.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Phosphotransferase system, HPr-related proteins
N2_066_000G1_scaffold_206_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15020..16351
DNA (1332bp) protein (444aa)
MiaB-like tRNA modifying enzyme (EC:1.3.1.74)
MiaB-like tRNA modifying enzyme Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG75_9FIRM
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:EES76054.2}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
N2_066_000G1_scaffold_206_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16603..16875
DNA (273bp) protein (91aa)
UPF0297 protein RSAG_02943 Tax=Ruminococcus RepID=C6JG76_9FIRM
UPF0297 protein BN806_02133 {ECO:0000256|HAMAP-Rule:MF_01507}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
N2_066_000G1_scaffold_206_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16877..17299
DNA (423bp) protein (141aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Putative Holliday junction resolvase Tax=Ruminococcus sp. CAG:9 RepID=R7CKG9_9FIRM
conserved hypothetical protein TIGR00250
N2_066_000G1_scaffold_206_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17312..17569
DNA (258bp) protein (86aa)
Uncharacterized protein Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76057.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Protein of unknown function (DUF1292).
N2_066_000G1_scaffold_206_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17588..19483
DNA (1896bp) protein (632aa)
Uncharacterized protein Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76058.2}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
putative hydrolase of the metallo-beta-lactamase superfamily protein
N2_066_000G1_scaffold_206_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19485..19829
DNA (345bp) protein (115aa)
Uncharacterized protein Tax=Ruminococcus sp. CAG:9 RepID=R7CJY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78539.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Protein of unknown function (DUF964).
N2_066_000G1_scaffold_206_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19919..20323
DNA (405bp) protein (135aa)
Uncharacterized protein Tax=Ruminococcus RepID=C6JG81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78540.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted periplasmic solute-binding protein
N2_066_000G1_scaffold_206_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20320..20964
DNA (645bp) protein (215aa)
Uncharacterized protein Tax=Ruminococcus RepID=C6JG82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76061.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
O-methyltransferase
N2_066_000G1_scaffold_206_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20970..22193
DNA (1224bp) protein (408aa)
Collagenase and related proteases (EC:3.4.-.-)
Uncharacterized protein Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76062.2}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
N2_066_000G1_scaffold_206_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22232..22861)
DNA (630bp) protein (210aa)
RNA polymerase sigma factor Tax=Ruminococcus sp. CAG:9 RepID=R7CMD5_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
RNA polymerase, sigma 27/28 subunit, RpsK/SigK
N2_066_000G1_scaffold_206_27
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23193..23849
DNA (657bp) protein (219aa)
Uncharacterized protein Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76065.2}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
N2_066_000G1_scaffold_206_28
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24098..25078
DNA (981bp) protein (327aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
tRNA-dihydrouridine synthase Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG87_9FIRM
tRNA-U20a,U20b-dihydrouridine synthase
N2_066_000G1_scaffold_206_29
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25180..26280
DNA (1101bp) protein (367aa)
Uncharacterized protein Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76067.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted multitransmembrane protein
N2_066_000G1_scaffold_206_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26277..27050
DNA (774bp) protein (258aa)
Uncharacterized protein Tax=Ruminococcus sp. CAG:9 RepID=R7CME0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78548.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
YibE/F-like protein.
Displaying items 1-30 of 61 in total

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