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N2_066_000G1_scaffold_269

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Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
N2_066_000G1_scaffold_269_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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92..4531
DNA (4440bp) protein (1480aa)
Fibronectin type III domain protein Tax=Clostridium perfringens D str. JGS1721 RepID=B1V512_CLOPF
Fibronectin type III domain protein {ECO:0000313|EMBL:EDT71084.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
fibronectin type III
N2_066_000G1_scaffold_269_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4874..5482
DNA (609bp) protein (203aa)
50S ribosomal protein L25 Tax=Clostridium perfringens RepID=RL25_CLOPE
50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
N2_066_000G1_scaffold_269_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5638..7365
DNA (1728bp) protein (576aa)
phosphomannomutase (EC:5.4.2.8)
Phosphoglucomutase/phosphomannomutase family protein Tax=Clostridium perfringens NCTC 8239 RepID=B1RL15_CLOPF
Phosphoglucomutase/phosphomannomutase family protein {ECO:0000313|EMBL:EDT22551.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
N2_066_000G1_scaffold_269_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7657..8754
DNA (1098bp) protein (366aa)
TPR domain-containing protein Tax=Clostridium perfringens RepID=H7CXR6_CLOPF
hypothetical protein
TPR domain-containing protein {ECO:0000313|EMBL:EIA16721.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
N2_066_000G1_scaffold_269_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8770..9486
DNA (717bp) protein (239aa)
Glycosyl transferase, WecB/TagA/CpsF family {ECO:0000313|EMBL:EDT22543.1}; EC=2.4.1.- {ECO:0000313|EMBL:EDT22543.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
WecB/TagA/CpsF family glycosyl transferase (EC:2.4.1.-)
Glycosyl transferase, WecB/TagA/CpsF family Tax=Clostridium perfringens RepID=B1RB58_CLOPF
N2_066_000G1_scaffold_269_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9486..10772
DNA (1287bp) protein (429aa)
Uncharacterized protein Tax=Clostridium perfringens C str. JGS1495 RepID=B1BIZ2_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS80448.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
N2_066_000G1_scaffold_269_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10801..11436
DNA (636bp) protein (212aa)
Methenyltetrahydrofolate cyclohydrolase Tax=Clostridium perfringens F262 RepID=H7CXR3_CLOPF
Methenyltetrahydrofolate cyclohydrolase {ECO:0000313|EMBL:EIA16718.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
methenyltetrahydrofolate cyclohydrolase
N2_066_000G1_scaffold_269_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11617..12414)
DNA (798bp) protein (266aa)
Delta-lactam-biosynthetic de-N-acetylase {ECO:0000313|EMBL:EDS80466.1}; EC=3.5.-.- {ECO:0000313|EMBL:EDS80466.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Polysaccharide deacetylase Tax=Clostridium perfringens RepID=H7CXR2_CLOPF
polysaccharide deacetylase
N2_066_000G1_scaffold_269_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12573..13670
DNA (1098bp) protein (366aa)
Ribosome-binding ATPase YchF Tax=Clostridium perfringens RepID=H7CXR1_CLOPF
ychF; GTP-dependent nucleic acid-binding protein EngD
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
N2_066_000G1_scaffold_269_trna_1
unknown

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comp(13769..13859)
DNA (91bp)
transferRNA SeC(p)
N2_066_000G1_scaffold_269_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14218..15150
DNA (933bp) protein (311aa)
mraW; S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Ribosomal RNA small subunit methyltransferase H Tax=Clostridium perfringens RepID=RSMH_CLOP1
N2_066_000G1_scaffold_269_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15222..15650
DNA (429bp) protein (143aa)
Cell division protein FtsL Tax=Clostridium perfringens RepID=H7CXQ9_CLOPF
cell division protein FtsL
Putative cell division protein FtsL {ECO:0000313|EMBL:EDT15067.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
N2_066_000G1_scaffold_269_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15838..18057
DNA (2220bp) protein (740aa)
Stage V sporulation protein D Tax=Clostridium perfringens RepID=H7CXQ8_CLOPF
Stage V sporulation protein D {ECO:0000313|EMBL:EDS80387.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
spoVD; stage V sporulation protein D
N2_066_000G1_scaffold_269_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18152..19606
DNA (1455bp) protein (485aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase Tax=Clostridium perfringens RepID=B1BIZ9_CLOPF
N2_066_000G1_scaffold_269_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19618..20979
DNA (1362bp) protein (454aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase Tax=Clostridium perfringens C str. JGS1495 RepID=B1BJ00_CLOPF
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
N2_066_000G1_scaffold_269_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21029..22000
DNA (972bp) protein (324aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase Tax=Clostridium perfringens RepID=MRAY_CLOP1
N2_066_000G1_scaffold_269_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22028..23152
DNA (1125bp) protein (375aa)
Stage V sporulation protein E Tax=Clostridium perfringens RepID=H7CXQ4_CLOPF
spoVE; stage V sporulation protein E
Stage V sporulation protein E {ECO:0000313|EMBL:EIA16709.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
N2_066_000G1_scaffold_269_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23310..24056
DNA (747bp) protein (249aa)
Cell division protein FtsQ Tax=Clostridium perfringens C str. JGS1495 RepID=B1BJ03_CLOPF
Cell division protein FtsQ {ECO:0000313|EMBL:EDS80270.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
cell division protein FtsQ
N2_066_000G1_scaffold_269_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24070..24786
DNA (717bp) protein (239aa)
Uncharacterized protein Tax=Clostridium perfringens RepID=H7CXQ2_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16707.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
N2_066_000G1_scaffold_269_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24799..25137
DNA (339bp) protein (113aa)
Small basic protein Tax=Clostridium perfringens RepID=H7CXQ0_CLOPF
sbp; small basic protein
Small basic protein {ECO:0000313|EMBL:EDT23339.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
N2_066_000G1_scaffold_269_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25150..25881
DNA (732bp) protein (244aa)
Uncharacterized protein Tax=Clostridium perfringens RepID=H7CXP9_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15079.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
N2_066_000G1_scaffold_269_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25981..26640
DNA (660bp) protein (220aa)
Uncharacterized protein Tax=Clostridium perfringens RepID=H7CXP8_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15109.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
N2_066_000G1_scaffold_269_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26659..27108
DNA (450bp) protein (150aa)
Cell division protein SepF Tax=Clostridium perfringens RepID=SEPF_CLOP1
hypothetical protein
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
N2_066_000G1_scaffold_269_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27110..27871
DNA (762bp) protein (254aa)
S4 domain protein Tax=Clostridium perfringens RepID=B1RKZ5_CLOPF
S4 domain-containing protein
Probable cell-division protein {ECO:0000313|EMBL:BAB81558.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
N2_066_000G1_scaffold_269_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27884..28510
DNA (627bp) protein (209aa)
Cell-division initiation protein DivIVA Tax=Clostridium perfringens RepID=H7CXP5_CLOPF
cell division protein DivIVA
Cell-division initiation protein DivIVA {ECO:0000313|EMBL:EIA16700.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
N2_066_000G1_scaffold_269_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28648..29568
DNA (921bp) protein (307aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Pseudouridine synthase Tax=Clostridium perfringens RepID=H7CXP4_CLOPF
RluA family pseudouridine synthase
N2_066_000G1_scaffold_269_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29572..30108
DNA (537bp) protein (179aa)
pyrR; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase (EC:2.4.2.9)
Bifunctional protein PyrR Tax=Clostridium perfringens RepID=PYRR_CLOP1
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
N2_066_000G1_scaffold_269_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30128..31255
DNA (1128bp) protein (376aa)
Uncharacterized protein Tax=Clostridium perfringens RepID=Q8XJB3_CLOPE
methyltransferase
Putative methyltransferase {ECO:0000313|EMBL:EIA16697.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
N2_066_000G1_scaffold_269_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31365..33092)
DNA (1728bp) protein (576aa)
Probable fibronectin-binding protein Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XJB4_CLOPE
fibronectin-binding protein
Probable fibronectin-binding protein {ECO:0000313|EMBL:BAB81553.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
N2_066_000G1_scaffold_269_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33184..34002
DNA (819bp) protein (273aa)
Diaminopimelate epimerase {ECO:0000255|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000255|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000255|HAMAP-Rule:MF_00197};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Diaminopimelate epimerase Tax=Clostridium perfringens (strain 13 / Type A) RepID=DAPF_CLOPE
dapF; diaminopimelate epimerase
Displaying items 1-30 of 31 in total

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