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N2_066_000G1_scaffold_1123

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Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
N2_066_000G1_scaffold_1123_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..653)
DNA (651bp) protein (217aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|HAMAP-Rule:MF_01904}; Short=PEPC {ECO:0000256|HAMAP-Rule:MF_01904};; Short=PEPCase {ECO:0000256|HAMAP-Rule:MF_01904};; EC=4.1.1.31 {ECO:0000256|HAMAP-Rule:MF_01904};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Phosphoenolpyruvate carboxylase Tax=Clostridium perfringens E str. JGS1987 RepID=B1BWT1_CLOPF
phosphoenolpyruvate carboxylase
N2_066_000G1_scaffold_1123_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1158..2312)
DNA (1155bp) protein (385aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB Tax=Clostridium perfringens RepID=MIAB_CLOP1
miaB; (dimethylallyl)adenosine tRNA methylthiotransferase
N2_066_000G1_scaffold_1123_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2496..3461)
DNA (966bp) protein (322aa)
Choloylglycine hydrolase family protein Tax=Clostridium perfringens RepID=B1BWT3_CLOPF
pac; choloylglycine hydrolase
Probable penicillin acylase {ECO:0000313|EMBL:BAB80798.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
N2_066_000G1_scaffold_1123_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3821..4213
DNA (393bp) protein (131aa)
Uncharacterized protein Tax=Clostridium perfringens RepID=Q8XLF1_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80797.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
N2_066_000G1_scaffold_1123_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4397..4867
DNA (471bp) protein (157aa)
Excisionase family DNA binding domain-containing protein Tax=Clostridium perfringens WAL-14572 RepID=H1CQG0_CLOPF
MerR family transcriptional regulator
MerR family transcriptional regulator {ECO:0000313|EMBL:EIA17268.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
N2_066_000G1_scaffold_1123_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4913..5377)
DNA (465bp) protein (155aa)
Putative membrane protein Tax=Clostridium perfringens NCTC 8239 RepID=B1RT65_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17267.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
N2_066_000G1_scaffold_1123_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5516..6088)
DNA (573bp) protein (191aa)
Uncharacterized protein Tax=Clostridium perfringens RepID=Q8XLF4_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80794.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
N2_066_000G1_scaffold_1123_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6225..6374
DNA (150bp) protein (50aa)
Uncharacterized protein Tax=Clostridium perfringens RepID=H7CVE7_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17265.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
N2_066_000G1_scaffold_1123_9
unknown

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comp(6337..6468)
DNA (132bp) protein (44aa)

This feature has no annotations

N2_066_000G1_scaffold_1123_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6474..7268)
DNA (795bp) protein (265aa)
Acetyltransferase, GNAT family Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TRF2_CLOP1
acetyltransferase
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDT25788.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
N2_066_000G1_scaffold_1123_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7378..8226)
DNA (849bp) protein (283aa)
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase Tax=Clostridium perfringens RepID=ISPH_CLOP1
N2_066_000G1_scaffold_1123_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8228..8881)
DNA (654bp) protein (218aa)
cmk; cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Cytidylate kinase Tax=Clostridium perfringens RepID=KCY_CLOP1
N2_066_000G1_scaffold_1123_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9003..10223)
DNA (1221bp) protein (407aa)
Uncharacterized protein Tax=Clostridium perfringens NCTC 8239 RepID=B1RT59_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT13853.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
N2_066_000G1_scaffold_1123_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10440..11315)
DNA (876bp) protein (292aa)
RpiR family transcriptional regulator Tax=Clostridium perfringens RepID=H7CVE2_CLOPF
RpiR family transcriptional regulator
RpiR family transcriptional regulator {ECO:0000313|EMBL:EIA17260.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
N2_066_000G1_scaffold_1123_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11347..11763)
DNA (417bp) protein (139aa)
Uncharacterized protein Tax=Clostridium perfringens C str. JGS1495 RepID=B1BFU8_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDS81344.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
N2_066_000G1_scaffold_1123_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11769..12479)
DNA (711bp) protein (237aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Pseudouridine synthase Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0STT8_CLOPS
rluB; ribosomal large subunit pseudouridine synthase B
N2_066_000G1_scaffold_1123_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12696..13379
DNA (684bp) protein (228aa)
Putative uncharacterized protein Tax=Clostridium perfringens WAL-14572 RepID=H1CQE9_CLOPF
AP endonuclease
AP endonuclease {ECO:0000313|EMBL:EIA17257.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
N2_066_000G1_scaffold_1123_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13799..14188
DNA (390bp) protein (130aa)
PadR family transcriptional regulator Tax=Clostridium perfringens RepID=H7CVD7_CLOPF
PadR family transcriptional regulator
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EDT25508.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
N2_066_000G1_scaffold_1123_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14287..15102)
DNA (816bp) protein (272aa)
accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha Tax=Clostridium perfringens RepID=ACCA_CLOP1
N2_066_000G1_scaffold_1123_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15095..15973)
DNA (879bp) protein (293aa)
accD; acetyl-CoA carboxylase, carboxyl transferase subunit beta (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta Tax=Clostridium perfringens RepID=ACCD_CLOP1
N2_066_000G1_scaffold_1123_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15966..17318)
DNA (1353bp) protein (451aa)
Acetyl-CoA carboxylase, biotin carboxylase {ECO:0000313|EMBL:EDT71013.1}; EC=6.4.1.2 {ECO:0000313|EMBL:EDT71013.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
accC; biotin carboxylase (EC:6.4.1.2)
Acetyl-CoA carboxylase, biotin carboxylase Tax=Clostridium perfringens RepID=B1RRF7_CLOPF
N2_066_000G1_scaffold_1123_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17330..17749)
DNA (420bp) protein (140aa)
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; Beta-hydroxyacyl-ACP dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Tax=Clostridium perfringens RepID=FABZ_CLOP1
N2_066_000G1_scaffold_1123_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17752..18243)
DNA (492bp) protein (164aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein Tax=Clostridium perfringens RepID=H7CVD2_CLOPF
accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:EDT71033.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
N2_066_000G1_scaffold_1123_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18255..19496)
DNA (1242bp) protein (414aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
fabF; 3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 2 Tax=Clostridium perfringens NCTC 8239 RepID=B1RRG0_CLOPF
N2_066_000G1_scaffold_1123_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19511..20251)
DNA (741bp) protein (247aa)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:EDT71029.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EDT71029.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase Tax=Clostridium perfringens RepID=B1RRG1_CLOPF
N2_066_000G1_scaffold_1123_26
unknown

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comp(20255..20323)
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 26 items

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